 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
GSMUA_AchrUn_randomP15520_001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 276aa MW: 30311.4 Da PI: 9.0892 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GSMUA_AchrUn_randomP15520_001 | genome | CIRAD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 59.3 | 6.5e-19 | 124 | 178 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ ++tkeq Le+ F+++++++ ++++ LAk+l+L rqV vWFqNrRa+ k
GSMUA_AchrUn_randomP15520_001 124 RKKLRLTKEQSALLEDRFKEHSTLTPKQKQALAKQLNLRPRQVEVWFQNRRARTK 178
788899***********************************************98 PP
|
| 2 | HD-ZIP_I/II | 122.1 | 2.7e-39 | 124 | 213 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerL 80
+kk+rl+keq++lLE+ F+e+++L+p++K++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e Lk++y++l++en+rL
GSMUA_AchrUn_randomP15520_001 124 RKKLRLTKEQSALLEDRFKEHSTLTPKQKQALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKKCYETLTNENQRL 203
69****************************************************************************** PP
HD-ZIP_I/II 81 ekeveeLreel 91
+ke +eL+ +l
GSMUA_AchrUn_randomP15520_001 204 QKELQELK-AL 213
*******9.55 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 276 aa
Download sequence Send
to blast |
MNPQDICDSG LSLGLGIGPT STASAEHRRR RKSISPCRNL IPDKPSLTLS LSDDVYGGLP 60
MPKAETNRAR EAPLSSPHSA ASAFSAAHEM NLKKEKDAGG EEVEVEVERV SSRGSDEEDN 120
SSARKKLRLT KEQSALLEDR FKEHSTLTPK QKQALAKQLN LRPRQVEVWF QNRRARTKLK 180
QTEVDCELLK KCYETLTNEN QRLQKELQEL KALKFAPPLY MQFPAATLTM CPSCERIGGG 240
GSSITDNSSK AGGAGPVVVP PKPGHFFNPF THSAAC
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 172 | 180 | RRARTKLKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
