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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
GSMUA_AchrUn_randomP13500_001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
|
| Family |
AP2 |
| Protein Properties |
Length: 344aa MW: 38481.3 Da PI: 8.5167 |
| Description |
AP2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GSMUA_AchrUn_randomP13500_001 | genome | CIRAD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 53.4 | 6.2e-17 | 11 | 70 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55
s y+GV++++++gr++A+++d ++n+ k+ k+++lg ++ +e Aa+a++ a++k++g
GSMUA_AchrUn_randomP13500_001 11 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDDEEAAARAYDLAALKYWG 70
57*******************766644468557*************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 344 aa
Download sequence Send
to blast |
MPPCAAGKRS SIYRGVTRHR WTGRYEAHLW DKSTWNQNQN KKGKQVYLGA YDDEEAAARA 60
YDLAALKYWG AGTLINFPVT DYARDLEEMQ MVSKEDYLVK SSAFSRGFPK YRGLSRQPQN 120
NRWETPFRQM PGDEYFNNCS TSSDAATDGR FAGIAGLERK VDLTSYIKWW MPKKARQPES 180
ASPVEDVGRE LRMLECSVQP TEPYKLPSLG LPGRGDAPQR LSACSILSRS DSFKSFLHKS 240
LNSGDIKDDG SHKTMDHEKS VPLLYSGCGL GISGVSVALN ELPVPRTAYQ MALLSAPLRS 300
SYPIDPASEP LLWTSPPPSQ QPLGEPQLRK NEMTSSAYAY QCQD
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
