PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_AchrUn_randomP06480_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family G2-like
Protein Properties Length: 295aa    MW: 33089.1 Da    PI: 7.0891
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_AchrUn_randomP06480_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.72.4e-321972255
                        G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                                   prlrWtpeLH +Fv+a+e+LGG++kAtPk +l+lm+v gLt++hvkSHLQ+YR+
  GSMUA_AchrUn_randomP06480_001 19 PRLRWTPELHLCFVHAIEKLGGQDKATPKLVLQLMDVRGLTISHVKSHLQMYRS 72
                                   8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.5E-311575IPR009057Homeodomain-like
PROSITE profilePS5129411.8131575IPR017930Myb domain
SuperFamilySSF466898.42E-161774IPR009057Homeodomain-like
TIGRFAMsTIGR015574.9E-241972IPR006447Myb domain, plants
PfamPF002494.5E-92071IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MGNCGRNGAV RQYVRSKVPR LRWTPELHLC FVHAIEKLGG QDKATPKLVL QLMDVRGLTI  60
SHVKSHLQMY RSMRNDLGKQ ELHERKHSCQ SNDEGPDEQD DVGSCHAWKS TKEFQSQFLY  120
SPLPSLKRSR LDAQPSSKKS VQCSQQICEA VTSQYWIDNY MQALAVDRGI KEEGFSWQRK  180
EGQQTEDLAA DHSSKLRVPG CMVEESDPLK LMPIEIYENG CLSHKSPPLN NEFAESEETN  240
DCSLSLSLSL HPSQSNNSSS DGGCCALGRN FNGRHSSYSV THRVNLDLSM SICGS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A4e-192074458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B4e-192074458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A4e-192074357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B4e-192074357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C4e-192074357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D4e-192074357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A4e-192074458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C4e-192074458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D4e-192074458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F4e-192074458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H4e-192074458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J4e-192074458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018676912.10.0PREDICTED: myb family transcription factor PHL8 isoform X2
TrEMBLM0U6V90.0M0U6V9_MUSAM; Uncharacterized protein
STRINGGSMUA_AchrUn_randomP06480_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP29663583
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14600.13e-34G2-like family protein