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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GSMUA_AchrUn_randomP04420_001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family |
Trihelix |
Protein Properties |
Length: 229aa MW: 25701.7 Da PI: 4.3822 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GSMUA_AchrUn_randomP04420_001 | genome | CIRAD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 46.7 | 8.1e-15 | 51 | 126 | 2 | 79 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79
Wt e l+L++ + m+e+ r+ + ++W+ +s+++ + + rs+ qCk +we+l y+ki+e+e+++ + s +
GSMUA_AchrUn_randomP04420_001 51 WTTYELLVLVNETAAMDEDWLRALSSYQKWKMISDNCVALDVIRSSYQCKRRWESLLAGYRKIREWESRHGE--GSYW 126
********************************************************************9833..3345 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 229 aa
Download sequence Send
to blast |
MEQAGIIQAL PITPMKEKES QRRKMSTDAS ISPRGPASSS RCTRSQAAAD WTTYELLVLV 60 NETAAMDEDW LRALSSYQKW KMISDNCVAL DVIRSSYQCK RRWESLLAGY RKIREWESRH 120 GEGSYWSLDS EEKHNLGLPT SFDPEIFGSM DTIIKPHEDQ AWWGDVDSEN LMDTAGGSED 180 LIVTMEAGML DANGAQDIIV GIYSGGGEQT CNQLNLDFDD CTPCTRRIT
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT4G31270.1 | 4e-35 | sequence-specific DNA binding transcription factors |