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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
GSMUA_AchrUn_randomP00460_001 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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| Family |
LBD |
| Protein Properties |
Length: 228aa MW: 24441.8 Da PI: 5.6992 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GSMUA_AchrUn_randomP00460_001 | genome | CIRAD | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 100.8 | 1.2e-31 | 4 | 107 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyG 75
+C++C+vlr++C++dC ++p++ p++q++++ +++k++G++ +++l++a pe+ r+++++sl+yeA+ r+ +P+yG
GSMUA_AchrUn_randomP00460_001 4 SCNGCRVLRKGCSDDCSIRPCLewirnPESQANATVFLAKFYGRAGLMNLINAGPEHLRPAIFRSLLYEACGRIVNPIYG 83
6******************************************************************************* PP
DUF260 76 avgvilklqqqleqlkaelallke 99
+vg+++++++ql+q++ e +l ++
GSMUA_AchrUn_randomP00460_001 84 SVGLLWSGSWQLCQAAMESVLKGS 107
****************99988765 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 228 aa
Download sequence Send
to blast |
MRMSCNGCRV LRKGCSDDCS IRPCLEWIRN PESQANATVF LAKFYGRAGL MNLINAGPEH 60
LRPAIFRSLL YEACGRIVNP IYGSVGLLWS GSWQLCQAAM ESVLKGSPIV QIPSEAAAAT 120
PVPPLKAYDI RHVAKDAELH KPNAGGSGGD GDGRENESVF SADAASHVSQ GELSPAEEGE 180
VGLELTLGLE PWLRPDRAIR PAGDSRCDVS RLNADTCKVD LCLQLPVA
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