PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GSMUA_Achr9P14690_001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family | bZIP | ||||||||
Protein Properties | Length: 156aa MW: 18014.4 Da PI: 10.1036 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 41.4 | 3e-13 | 66 | 120 | 4 | 58 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 +r rr+++NRe+ArrsR RK++ eL + v L + N++L +el++ e ++ GSMUA_Achr9P14690_001 66 ERRKRRMISNRESARRSRMRKQKHFSELWTQVVHLRSANRQLLDELNRVMRERDR 120 689*********************************************9888765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.1E-15 | 63 | 127 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 8.4E-11 | 64 | 119 | No hit | No description |
PROSITE profile | PS50217 | 11.185 | 65 | 128 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.1E-11 | 65 | 120 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.0E-12 | 67 | 117 | No hit | No description |
CDD | cd14702 | 9.64E-17 | 68 | 119 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 70 | 85 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 156 aa Download sequence Send to blast |
MHPGEIASFG YLSPSDSPAF SVTSHLSSLF GPYLAQQLQT TPLMHCLSSS AAWDEAGGHQ 60 LSVAEERRKR RMISNRESAR RSRMRKQKHF SELWTQVVHL RSANRQLLDE LNRVMRERDR 120 IMHENDQLRH EETELRKKLE RLPAVFGCAP HGAEKL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 66 | 87 | RRKRRMISNRESARRSRMRKQK |
2 | 79 | 86 | RRSRMRKQ |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00647 | PBM | Transfer from LOC_Os02g49560 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009417568.1 | 1e-113 | PREDICTED: basic leucine zipper 43-like | ||||
TrEMBL | M0U0C7 | 1e-111 | M0U0C7_MUSAM; Uncharacterized protein | ||||
STRING | GSMUA_Achr9P14690_001 | 1e-112 | (Musa acuminata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1186 | 35 | 126 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 3e-24 | basic leucine-zipper 42 |