PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr9P09770_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bHLH
Protein Properties Length: 319aa    MW: 35402.4 Da    PI: 6.4543
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr9P09770_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.82.1e-09190238355
                            HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                             +h+ +Er RR+ri +++  L+ l+P +    +k   Ka +L + ++Y+ksLq
  GSMUA_Achr9P09770_001 190 NSHSLAERVRRERISERMRFLQNLVPGC----GKITGKAVMLDEIINYVKSLQ 238
                            58**************************....788*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.28E-17185255IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.23E-11185242No hitNo description
Gene3DG3DSA:4.10.280.101.4E-16187256IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.977187237IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-6190238IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.8E-8193243IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MYRNEASALE NAAEDFLDTD WGPFSSLDQN VWLKETAGVF SHGGVPETTE IGGSHDGTGQ  60
IARCSSFGTE KLPDMLGSIR TPSAASSEHQ TRSRCTQKRR KEVSDWFAPS PQSSFDATQN  120
ANTEWHKDVP ADIVNSATKK DESKEYDCEQ NADANSYNLD AKLAEESHQI VGVTKEDHVR  180
SRAKRGQATN SHSLAERVRR ERISERMRFL QNLVPGCGKI TGKAVMLDEI INYVKSLQQQ  240
VEFLSMKLAA VHPEINLKHL SDSLHGSGKL EPCSASSITP LQLALLIHFL HGKASILWDA  300
ELHNVLHMHF NSDPPSRTQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018687016.11e-113PREDICTED: transcription factor bHLH74-like
TrEMBLM0TYY60.0M0TYY6_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr9P09770_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP60333650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.18e-33bHLH family protein