PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr8P17130_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family EIL
Protein Properties Length: 547aa    MW: 61850.8 Da    PI: 4.815
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr8P17130_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3307.15.5e-94673206263
                            XXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                   EIN3   6 rmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLra 93 
                            + w + +++k+lke +k ++ ++++   a+  + s+eq+rrkk +r+Q  iL  Ml  +e   aqGfvYgi+p kgkpv gas++Lr+
  GSMUA_Achr8P17130_001  67 HIWNNINRMKHLKEHHKCKIIQQSS---ASLLDYSQEQSRRKKLARSQEKILNEMLELIEEGLAQGFVYGIVPYKGKPVIGASNNLRK 151
                            5798899999999998888855555...555679****************************************************** PP

                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHH CS
                   EIN3  94 WWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelww 181
                            WWke v+fdrngpaais yq +      ++++ t++ss +  l+elqDTtlgSLLsalm  cdppqrrfplekg++pPWWP+ +e+ww
  GSMUA_Achr8P17130_001 152 WWKETVRFDRNGPAAISTYQRDSCTNVIGKEN-TSESSVPEALQELQDTTLGSLLSALMPYCDPPQRRFPLEKGIPPPWWPNMSEEWW 238
                            *******************7776665555555.4499*************************************************** PP

                            HHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX CS
                   EIN3 182 gelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah 263
                             e++l+kd ++ppykkphdlkkawkvsvL avikh+ p++e+i++l ++sk lqdk++ake ++l +v+++e k++  ++ +
  GSMUA_Achr8P17130_001 239 REMSLPKDPSPPPYKKPHDLKKAWKVSVLIAVIKHLLPDVEKIQRLIEKSKGLQDKITAKEVDILNAVIRRELKKYFGLQHN 320
                            ************************************************************************9998777666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.4E-9864310No hitNo description
Gene3DG3DSA:1.10.3180.101.1E-58184314IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167683.53E-49191312IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 547 aa     Download sequence    Send to blast
MQDTKAKQNV GFSERTDGCS SVIPESILDP STELEDLLGL PPDNMFDTPL PDVIEADEFE  60
AERLRIHIWN NINRMKHLKE HHKCKIIQQS SASLLDYSQE QSRRKKLARS QEKILNEMLE  120
LIEEGLAQGF VYGIVPYKGK PVIGASNNLR KWWKETVRFD RNGPAAISTY QRDSCTNVIG  180
KENTSESSVP EALQELQDTT LGSLLSALMP YCDPPQRRFP LEKGIPPPWW PNMSEEWWRE  240
MSLPKDPSPP PYKKPHDLKK AWKVSVLIAV IKHLLPDVEK IQRLIEKSKG LQDKITAKEV  300
DILNAVIRRE LKKYFGLQHN APPPPPSMEG KSCREAVGDA FTSNIVGQPI SEAMQEESMN  360
VTQYLAMDVN MFTRQNELGP QDQPRGSIHQ DNFAHIHHCV ASVSHGNQPL SNPYGSCLPV  420
VDDNPVLPRG VIEMRHQGTS SSDMNLFETR LNEDQAPLPE AMKIEIDPVF TSSVQEDMMG  480
TSVTEELANS VQPQIFPSNE TVSFEPIFGQ DFDIGSASYF STMDQPSRLP DSFHELDEYD  540
WSKDFGN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A2e-551883101123Protein ETHYLENE INSENSITIVE 3
4zds_B2e-551883101123Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor acting as a positive regulator in the ethylene response pathway (PubMed:19798512). Involved in wound signaling by binding specifically to the DNA sequence 5'-ATGTACCT-3' found in the promoter of some wound-inducible genes (PubMed:19798512). Binds directly to the DNA sequence 5'-TGTTACAAATACC-3' in the promoter of the GA20OX2 gene to activate its expression at the transcriptional level during ethylene signaling (PubMed:30002253). {ECO:0000269|PubMed:19798512, ECO:0000269|PubMed:30002253}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by wounding. {ECO:0000269|PubMed:19798512}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009387670.10.0PREDICTED: protein ETHYLENE INSENSITIVE 3-like
SwissprotQ8W3M01e-101EIL1B_ORYSJ; Protein ETHYLENE-INSENSITIVE 3-like 1b
TrEMBLM0TR660.0M0TR66_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr8P17130_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20770.16e-92EIL family protein
Publications ? help Back to Top
  1. Kuroha T, et al.
    Ethylene-gibberellin signaling underlies adaptation of rice to periodic flooding.
    Science, 2018. 361(6398): p. 181-186
    [PMID:30002253]