PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GSMUA_Achr7P25310_001

Organism

Musa acuminata

Taxonomic ID

4641

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa

Family

bZIP

Protein Properties

Length: 276aa MW: 30197 Da PI: 9.4888

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GSMUA_Achr7P25310_001	genome	CIRAD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	28.9	2.6e-09	157	193	5	41
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeae 41 kr +r NR +A+rsR RK+++i eLe+ v +L+a GSMUA_Achr7P25310_001 157 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAR 193 8999*****************************9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	8.2E-8	153	218	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.611	155	194	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.4E-10	157	211	No hit	No description
SuperFamily	SSF57959	1.53E-8	157	195	No hit	No description
Pfam	PF00170	2.0E-7	157	192	IPR004827	Basic-leucine zipper domain
CDD	cd14703	1.50E-19	158	209	No hit	No description
PROSITE pattern	PS00036	0	160	175	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009555	Biological Process	pollen development
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence Send to blast
MQRSVGATAQ LPPKVPNTMS GNWSYFGHHA APSAALGPHH FLPAAAPPAP GSQPSWVDEF 60 LDFSAARRSQ HRRIASDSVA FLEAPLVDEG GGFDRLDDDQ LMSMFSDEVP APPSSSSGVA 120 AGGPEEAQSV CKTEPEAVTA AMTTKPAAES ETFVDPKRVK RILANRQSAQ RSRVRKLQYI 180 SELERSVTSL QARRLSALSP RVAFLDHQRS ILTMGNSHLK QRIAALAQDK IFKDAHQEAL 240 KKEIERLRQV YHQLNLDKMA ASNAEPAART EKELRS

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator involved in the sporophytic control of cell wall patterning and gametophytic control of pollen development. May play a role in the control of metabolic pathways regulating cellular transport and lipid metabolism. {ECO:0000269\|PubMed:17719007, ECO:0000269\|PubMed:19449183}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009410935.1	1e-179	PREDICTED: basic leucine zipper 61-like
Swissprot	F4IN23	3e-83	BZP34_ARATH; Basic leucine zipper 34
TrEMBL	M0TKL7	0.0	M0TKL7_MUSAM; Uncharacterized protein
STRING	GSMUA_Achr7P25310_001	0.0	(Musa acuminata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1322	38	125

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42380.2	3e-76	bZIP family protein

Publications ? help Back to Top
Jiang J,Zhang Z,Cao J Pollen wall development: the associated enzymes and metabolic pathways. Plant Biol (Stuttg), 2013. 15(2): p. 249-63 [PMID:23252839] Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Gibalová A, et al. Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]