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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GSMUA_Achr7P23650_001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family |
NAC |
Protein Properties |
Length: 348aa MW: 39350.2 Da PI: 8.9097 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GSMUA_Achr7P23650_001 | genome | CIRAD | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 161.4 | 3.5e-50 | 19 | 145 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88
l+pGfrFhPt+eel+ +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg
GSMUA_Achr7P23650_001 19 LMPGFRFHPTEEELIEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPAYAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGA 105
689***************************.89***************888889********************************** PP
NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
d+ + +++++ +glkktLvfy+g+apkg +t+W+m+eyrl
GSMUA_Achr7P23650_001 106 DRVIRNENNRSIGLKKTLVFYSGKAPKGLRTSWIMNEYRL 145
**************************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 348 aa
Download sequence Send
to blast |
MVIVASAMGA GDGHEHDLLM PGFRFHPTEE ELIEFYLRRK VEGKRFNVEL ITFLDLYRYD 60 PWELPAYAAI GEKEWFFYVP RDRKYRNGDR PNRVTTSGYW KATGADRVIR NENNRSIGLK 120 KTLVFYSGKA PKGLRTSWIM NEYRLPQSET DQYRKIFLQV EISICRVYKR PGVEDRPRLP 180 GTLGSKPSSS RGTGMNRKHN TSHHQIGGDS QEVRDGSSTS LPSSSLQPKP TVHGSTTASV 240 ASLSSTTSTE EDGTSFLQSN NMSGVTPTCS LLPHTSPSMA TQMIDELNRL VGFNQNRMNN 300 PSQFLHPPSQ TQLQLPFNAL PMSLTTASDK LWEWSALQET GREYTDFE
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 1e-53 | 19 | 170 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-53 | 19 | 170 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-53 | 19 | 170 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-53 | 19 | 170 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
4dul_A | 1e-53 | 19 | 170 | 17 | 165 | NAC domain-containing protein 19 |
4dul_B | 1e-53 | 19 | 170 | 17 | 165 | NAC domain-containing protein 19 |
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