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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
GSMUA_Achr7P15910_001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 154aa MW: 18281.9 Da PI: 8.8793 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GSMUA_Achr7P15910_001 | genome | CIRAD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 60.4 | 2.9e-19 | 44 | 98 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
r++ ++++eql Le+ F+ ++++ ++e++eLA++l+L+ rqV vWFqNrRa++k
GSMUA_Achr7P15910_001 44 RRKLRLSEEQLSLLEDSFRAHNTLAHDEKRELAQRLHLQPRQVEVWFQNRRARRK 98
567789***********************************************98 PP
|
| 2 | HD-ZIP_I/II | 113.6 | 1.2e-36 | 44 | 132 | 1 | 89 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88
++k+rls+eq++lLE+sF+++++L +++K ela++L+lqprqv+vWFqnrRAR k+kq+E+d+e+L++++++l++en+rL++e eLr
GSMUA_Achr7P15910_001 44 RRKLRLSEEQLSLLEDSFRAHNTLAHDEKRELAQRLHLQPRQVEVWFQNRRARRKLKQTEEDCESLRKCCQRLTNENRRLKRELMELR 131
59*************************************************************************************9 PP
HD-ZIP_I/II 89 e 89
+
GSMUA_Achr7P15910_001 132 A 132
6 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 154 aa
Download sequence Send
to blast |
MIQEEECDVV LRLAVGGGEK TPVREISERL MRPANEREEA EGTRRKLRLS EEQLSLLEDS 60
FRAHNTLAHD EKRELAQRLH LQPRQVEVWF QNRRARRKLK QTEEDCESLR KCCQRLTNEN 120
RRLKRELMEL RAARLITCSS CEKIARDEKK TINS
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 92 | 100 | RRARRKLKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that binds to the DNA sequence 5'-CAAT[GC]ATTG-3'. {ECO:0000269|PubMed:10732669}. |
