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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
GSMUA_Achr7P12740_001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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| Family |
HD-ZIP |
| Protein Properties |
Length: 228aa MW: 25875.6 Da PI: 4.57 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GSMUA_Achr7P12740_001 | genome | CIRAD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 56.5 | 4.6e-18 | 49 | 102 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++ eq+++Le+ Fe ++++ e++ +LA++l L+ rqV vWFqNrRa++k
GSMUA_Achr7P12740_001 49 KKRRLSVEQVRALEKNFEVDNKLEPERKVRLAQELVLQPRQVAVWFQNRRARWK 102
556899***********************************************9 PP
|
| 2 | HD-ZIP_I/II | 131 | 4.5e-42 | 49 | 140 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89
kkrrls eqv++LE++Fe ++kLeperKv+la+eL lqprqvavWFqnrRAR+ktkqlE+dy+aLk++ydal+ + ++L++++e+L +
GSMUA_Achr7P12740_001 49 KKRRLSVEQVRALEKNFEVDNKLEPERKVRLAQELVLQPRQVAVWFQNRRARWKTKQLEHDYAALKASYDALRLDYDALRRDNESLIA 136
9**************************************************************************************9 PP
HD-ZIP_I/II 90 elke 93
e+ke
GSMUA_Achr7P12740_001 137 EIKE 140
9987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 228 aa
Download sequence Send
to blast |
MKRSLSYSDH PSMPAGEERG MFQSFMDGLE DDDGVEQEEM CNGGERGSKK RRLSVEQVRA 60
LEKNFEVDNK LEPERKVRLA QELVLQPRQV AVWFQNRRAR WKTKQLEHDY AALKASYDAL 120
RLDYDALRRD NESLIAEIKE LKTKLTASDK EEAMTSKAEE KAAAPEEPLA KDGSSDSDSS 180
AVLLNDQDSP RGRSSSASTE ELLGGDEPCG SSFFSYDQTP FPSWYYWT
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 96 | 104 | RRARWKTKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription activator that binds to the DNA sequence 5'-CAAT[AT]ATTG-3'. May be involved in the regulation of gibberellin signaling. {ECO:0000269|PubMed:10732669, ECO:0000269|PubMed:18049796}. |
| UniProt | Probable transcription activator that binds to the DNA sequence 5'-CAAT[AT]ATTG-3'. May be involved in the regulation of gibberellin signaling. {ECO:0000269|PubMed:10732669, ECO:0000269|PubMed:18049796}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By gibberellin. Down-regulated in leaves by drought stress. {ECO:0000269|PubMed:17999151, ECO:0000269|PubMed:18049796}. |
| UniProt | INDUCTION: By gibberellin. Down-regulated in leaves by drought stress. {ECO:0000269|PubMed:17999151, ECO:0000269|PubMed:18049796}. |
