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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GSMUA_Achr7P11760_001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family |
HD-ZIP |
Protein Properties |
Length: 252aa MW: 28673.3 Da PI: 4.6318 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GSMUA_Achr7P11760_001 | genome | CIRAD | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 60.4 | 2.9e-19 | 48 | 101 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++ +q+++Le+ Fe +++++ e++ +LA+ lgL+ rqV vWFqNrRa++k
GSMUA_Achr7P11760_001 48 KKRRLSVDQVKALEKNFEVENKLDPERKVRLARDLGLQPRQVAVWFQNRRARWK 101
456899***********************************************9 PP
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2 | HD-ZIP_I/II | 126.5 | 1.2e-40 | 47 | 139 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88
ekkrrls +qvk+LE++Fe e+kL+perKv+lar+LglqprqvavWFqnrRAR+ktkqlE+dy aLk+ +d lk + ++L++++e L
GSMUA_Achr7P11760_001 47 EKKRRLSVDQVKALEKNFEVENKLDPERKVRLARDLGLQPRQVAVWFQNRRARWKTKQLERDYGALKSLHDDLKLDCDALRRDKELLL 134
69*************************************************************************************9 PP
HD-ZIP_I/II 89 eelke 93
+e++e
GSMUA_Achr7P11760_001 135 AEIRE 139
99876 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 252 aa
Download sequence Send
to blast |
MKQVRWRFVI QVEEKGKYEA VLVDGIEEVE CEEEEELCSN GPSGLGEKKR RLSVDQVKAL 60 EKNFEVENKL DPERKVRLAR DLGLQPRQVA VWFQNRRARW KTKQLERDYG ALKSLHDDLK 120 LDCDALRRDK ELLLAEIREL KAKLADTGMD ATQSEIIKAV EEARAPLIYK DGASDSDSSV 180 VFNDETSPYG GLVLHQNCLM EFKPRSSSLS FENKAMDEGF LGGDELCSSL FSEQPAPSLS 240 WYCSDPCEYK GD
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 95 | 103 | RRARWKTKQ |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |
UniProt | Probable transcription factor. {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Down-regulated in leaves by drought stress. {ECO:0000269|PubMed:17999151}. |