PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GSMUA_Achr7P10980_001

Organism

Musa acuminata

Taxonomic ID

4641

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa

Family

VOZ

Protein Properties

Length: 507aa MW: 56418.5 Da PI: 6.5102

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GSMUA_Achr7P10980_001	genome	CIRAD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	437	2.6e-134	230	446	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaataks 88 pppsafl+pkcalwdc+rpa+gsew+qdycssfhatlalneg+pgt+pvlrp+gidlkdg+lfaal ak qgk+vgipecegaat++s GSMUA_Achr7P10980_001 230 PPPSAFLRPKCALWDCPRPARGSEWFQDYCSSFHATLALNEGPPGTSPVLRPGGIDLKDGPLFAALVAKSQGKNVGIPECEGAATNRS 317 89************************************************************************************ PP VOZ 89 pwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeine 176 pwna+elfdl +l+ge++rewlffdkprrafesgnrkqrslpdy+grgwhesrkqvmkefgglkrsyymdpqp+s+fewhlyeyein+ GSMUA_Achr7P10980_001 318 PWNAPELFDLLVLNGESLREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMKEFGGLKRSYYMDPQPLSHFEWHLYEYEIND 405 ************************************************************************************ PP VOZ 177 ldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 +da+alyrlelklvd kksak+kv+ ds++dlq+++grl+a GSMUA_Achr7P10980_001 406 CDACALYRLELKLVDPKKSAKAKVTIDSMVDLQQQMGRLNA 446 ************************************986 PP

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009408	Biological Process	response to heat
GO:0009414	Biological Process	response to water deprivation
GO:0009631	Biological Process	cold acclimation
GO:0009816	Biological Process	defense response to bacterium, incompatible interaction
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0048578	Biological Process	positive regulation of long-day photoperiodism, flowering
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 507 aa Download sequence Send to blast
MRKRSGGGGG AALHHNHHRR AMREKAKNQV DDLQAMFVGL QSARREGRAA DAAVLEEQLH 60 QLLREWKTEL SEPSPAASAC SSFLKGHSRG PSDLSSYIRR MLQLNEEEED DDATSKLTVL 120 PPKDEPLEVL GPYPVGLQSG AAAAFLREEY LMAQEMPGYG FVAAQQYKCG STGAQHAALQ 180 CLEGADDLQI QHYNLHQQLP QNVLFGFTAA GFDAGDLAPP FCEFVAATCP PPSAFLRPKC 240 ALWDCPRPAR GSEWFQDYCS SFHATLALNE GPPGTSPVLR PGGIDLKDGP LFAALVAKSQ 300 GKNVGIPECE GAATNRSPWN APELFDLLVL NGESLREWLF FDKPRRAFES GNRKQRSLPD 360 YNGRGWHESR KQVMKEFGGL KRSYYMDPQP LSHFEWHLYE YEINDCDACA LYRLELKLVD 420 PKKSAKAKVT IDSMVDLQQQ MGRLNAENKA MESKRYAKGR PRFHYKDSAE AMYSASDFIG 480 RMEDGQSLHS SLEQEAVADK LHGYFGT

Sequence ? help Back to Top

Protein Sequence Length: 507 aa Download sequence Send to blast

MRKRSGGGGG AALHHNHHRR AMREKAKNQV DDLQAMFVGL QSARREGRAA DAAVLEEQLH  60
QLLREWKTEL SEPSPAASAC SSFLKGHSRG PSDLSSYIRR MLQLNEEEED DDATSKLTVL  120
PPKDEPLEVL GPYPVGLQSG AAAAFLREEY LMAQEMPGYG FVAAQQYKCG STGAQHAALQ  180
CLEGADDLQI QHYNLHQQLP QNVLFGFTAA GFDAGDLAPP FCEFVAATCP PPSAFLRPKC  240
ALWDCPRPAR GSEWFQDYCS SFHATLALNE GPPGTSPVLR PGGIDLKDGP LFAALVAKSQ  300
GKNVGIPECE GAATNRSPWN APELFDLLVL NGESLREWLF FDKPRRAFES GNRKQRSLPD  360
YNGRGWHESR KQVMKEFGGL KRSYYMDPQP LSHFEWHLYE YEINDCDACA LYRLELKLVD  420
PKKSAKAKVT IDSMVDLQQQ MGRLNAENKA MESKRYAKGR PRFHYKDSAE AMYSASDFIG  480
RMEDGQSLHS SLEQEAVADK LHGYFGT

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_018684559.1	0.0	PREDICTED: transcription factor VOZ1-like isoform X1
Swissprot	Q9SGQ0	1e-174	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	M0TGI6	0.0	M0TGI6_MUSAM; Uncharacterized protein
STRING	GSMUA_Achr7P10980_001	0.0	(Musa acuminata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2343	38	88

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-169	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]