PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr7P10910_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bHLH
Protein Properties Length: 341aa    MW: 37358.9 Da    PI: 7.6209
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr7P10910_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.60.000532092471255
                            HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            R +++ +++  L +++ +      +K + a++L +A+ YI+ Lq
  GSMUA_Achr7P10910_001 209 RKEKLGDRITALHQIVSPF-----GKTDTASVLLEAIGYIRFLQ 247
                            6677888999999999987.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.655197246IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.06E-10207259IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.93E-5207251No hitNo description
Gene3DG3DSA:4.10.280.102.6E-7211254IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MNRGLFQNSL VQHMVGGSSN CWSLNSMRPP PEQTFPLLPS SSSSSSPSVS PQYPQPSTTL  60
PMIPFHGSQD LPESWSQLLL AEEEKYGLTP PQIGKMKNWE DRLVYPSTTP PHMSDIKQEI  120
SGNCYLHSGG SEEIQASTSP WSRIIPSSSP GSCNAASFGR NMLDFSNKSE RMHHQPDNSP  180
ECNSTEAGVV LKKARVQGTS SAHSTFKVRK EKLGDRITAL HQIVSPFGKT DTASVLLEAI  240
GYIRFLQSQI EALSSPYLSS GSGNMKQPAQ GERRRIFAEE AGHLLNGNGS KKRGRPDQEG  300
NVEPKKDLRS RGLCLVPVSF FLDVESDNGA DYWVPTLHGA F
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009409062.10.0PREDICTED: transcription factor bHLH68-like
TrEMBLM0TGH90.0M0TGH9_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr7P10910_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2167817
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.13e-63bHLH family protein