 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
GSMUA_Achr6P36450_001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 232aa MW: 26906.1 Da PI: 6.4069 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GSMUA_Achr6P36450_001 | genome | CIRAD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 56.4 | 5.2e-18 | 37 | 89 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+ +++ eq+++Le+ F + +++ e++ eLA++lgL+ rq+ +WFqNrRa++k
GSMUA_Achr6P36450_001 37 KKRLNLEQVRTLEKSFVMGKKLEPERKMELARSLGLQPRQIAIWFQNRRARWK 89
4568889*********************************************9 PP
|
| 2 | HD-ZIP_I/II | 123.6 | 9.6e-40 | 35 | 125 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88
ekk+rl+ eqv++LE+sF + +kLeperK+elar+Lglqprq+a+WFqnrRAR+k kqlEkdy+ Lkr+++ +k++n++L+++++eL
GSMUA_Achr6P36450_001 35 EKKKRLNLEQVRTLEKSFVMGKKLEPERKMELARSLGLQPRQIAIWFQNRRARWKIKQLEKDYDELKRQFEMMKAQNDALHAHNKELL 122
69*************************************************************************************9 PP
HD-ZIP_I/II 89 eel 91
+++
GSMUA_Achr6P36450_001 123 SQI 125
987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 232 aa
Download sequence Send
to blast |
MDAGRRSTSF SGMETCEELN LEDDISDDGL QPPGEKKKRL NLEQVRTLEK SFVMGKKLEP 60
ERKMELARSL GLQPRQIAIW FQNRRARWKI KQLEKDYDEL KRQFEMMKAQ NDALHAHNKE 120
LLSQILSLKG KDVSESINLN KETEGSCSMR SENSPDISLE ISREPMNHNP SDLHQQSRTF 180
FPSASQLLHS SSKSETPKVE SSVQRDNLCN MFYSTDDQSA FWAWSEQHNF HQ
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor that may act in the sucrose-signaling pathway. {ECO:0000269|PubMed:11292072}. |
| Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Ribone PA,Capella M,Chan RL
Functional characterization of the homeodomain leucine zipper I transcription factor AtHB13 reveals a crucial role in Arabidopsis development.
J. Exp. Bot., 2015. 66(19): p. 5929-43
[PMID:26136262] - Wang X, et al.
Overexpressed BRH1, a RING finger gene, alters rosette leaf shape in Arabidopsis thaliana.
Sci China Life Sci, 2018. 61(1): p. 79-87
[PMID:28887625] - Ebrahimian-Motlagh S, et al.
JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13.
Front Plant Sci, 2017. 8: p. 2118
[PMID:29326734]
|
