PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GSMUA_Achr6P20070_001

Organism

Musa acuminata

Taxonomic ID

4641

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa

Family

G2-like

Protein Properties

Length: 44aa MW: 5282.1 Da PI: 11.756

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GSMUA_Achr6P20070_001	genome	CIRAD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	37.3	6e-12	18	41	2	25
G2-like 2 prlrWtpeLHerFveaveqLGGse 25 pr+rWt+eLH+ Fveav++LGG + GSMUA_Achr6P20070_001 18 PRIRWTEELHRLFVEAVDKLGGRN 41 9*********************86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	5.8E-10	14	41	IPR009057	Homeodomain-like
SuperFamily	SSF46689	3.94E-6	16	41	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	5.7E-9	18	42	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 44 aa Download sequence Send to blast
MICFGTRGVR RYNRSQTPRI RWTEELHRLF VEAVDKLGGR NSKF

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	M0T8K5	2e-24	M0T8K5_MUSAM; Uncharacterized protein
STRING	GSMUA_Achr6P20070_001	3e-25	(Musa acuminata)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14600.1	1e-10	G2-like family protein