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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GSMUA_Achr6P15970_001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family | bZIP | ||||||||
Protein Properties | Length: 194aa MW: 22306.9 Da PI: 8.5106 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 48.6 | 1.7e-15 | 125 | 171 | 5 | 52 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 +r +r++kNRe+A rsR+RK+a++ eLe+k+ L++eN++Lkk+ +el GSMUA_Achr6P15970_001 125 RRHKRLIKNRESAARSRARKQAYTNELENKISLLQEENERLKKQ-KEL 171 799**************************************954.444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PRINTS | PR00041 | 4.1E-5 | 32 | 54 | IPR001630 | cAMP response element binding (CREB) protein |
PRINTS | PR00041 | 4.1E-5 | 120 | 136 | IPR001630 | cAMP response element binding (CREB) protein |
SMART | SM00338 | 2.4E-10 | 121 | 188 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.208 | 123 | 168 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.3E-12 | 124 | 168 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 5.23E-19 | 125 | 171 | No hit | No description |
SuperFamily | SSF57959 | 2.25E-11 | 125 | 170 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 5.7E-14 | 125 | 173 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 128 | 143 | IPR004827 | Basic-leucine zipper domain |
PRINTS | PR00041 | 4.1E-5 | 138 | 158 | IPR001630 | cAMP response element binding (CREB) protein |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence Send to blast |
METDRGCGCG CEGSIPAPHA VNRTTADEVW RDIRQRRRKE SREQQPALGE MILEDFLVNA 60 EVGAEDSCIA FMPREHWLQH RHCDHHHQQL QASALASDNP ATSDPQTPGR KRAAGGEVSE 120 KTAERRHKRL IKNRESAARS RARKQAYTNE LENKISLLQE ENERLKKQKE LESAIHEPQP 180 ETKYQLRRTR SVPF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009404690.2 | 1e-143 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
Swissprot | Q9LES3 | 8e-47 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | M0T7E5 | 1e-141 | M0T7E5_MUSAM; Uncharacterized protein | ||||
STRING | GSMUA_Achr6P15970_001 | 1e-142 | (Musa acuminata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2707 | 38 | 83 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56850.1 | 8e-43 | ABA-responsive element binding protein 3 |
Publications ? help Back to Top | |||
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