PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr6P15930_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family EIL
Protein Properties Length: 518aa    MW: 58584.1 Da    PI: 6.646
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr6P15930_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3494.94.3e-151744061354
                            XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                   EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegas 88 
                            eel++rmw+d+m+lkrl+e+++++   ke+  +++k+++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+gas
  GSMUA_Achr6P15930_001  74 EELERRMWRDRMRLKRLREQQQNKN--KEQ-GDTAKQHQSQEQARRKKMSRAQDGILKYMLKMMEVCQAQGFVYGIIPEKGKPVSGAS 158
                            8********************9965..776.89999**************************************************** PP

                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S CS
                   EIN3  89 dsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtG 176
                            d+Lr+WWkekv+fdrngpaai+kyqa+n+i++++s+  + +++++hsl+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWPtG
  GSMUA_Achr6P15930_001 159 DNLRGWWKEKVRFDRNGPAAIAKYQADNAIPGSSSET-IPGTVSPHSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPTG 245
                            *******************************988877.77************************************************ PP

                            --HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX. CS
                   EIN3 177 kelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah. 263
                            +e+ww+elg++kdqg+ppykkphdlkkawkvsvLtavikhmsp+ie+ir+l+rqsk+lqdkm+ake +++l+v++qee+ + +++++ 
  GSMUA_Achr6P15930_001 246 REEWWPELGFPKDQGPPPYKKPHDLKKAWKVSVLTAVIKHMSPDIEKIRRLVRQSKCLQDKMTAKEIATWLAVVKQEEDVYLKLHPNt 333
                            ***************************************************************************************8 PP

                            .XXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXX CS
                   EIN3 264 .ssslrkqspkvtlsceqkedvegkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsis 350
                             ++ ++ ++ +++ sc+ ++d e     +           ++++++kr    +e++ + +++v +tc+++++++++ + +f+d+n+++
  GSMUA_Achr6P15930_001 334 cPPPSSGSAISFNSSCS-DYDIE-----E----------INCDFIQKRT--AAEPQLMLNQRV-YTCDNAKCPHHDFRQGFTDRNARN 402
                            65566668888888888.77665.....2..........25899****8..899****99976.************************ PP

                            XXXX CS
                   EIN3 351 qney 354
                            +++y
  GSMUA_Achr6P15930_001 403 RHQY 406
                            **98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.7E-13274323No hitNo description
Gene3DG3DSA:1.10.3180.103.8E-74199333IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.03E-60202326IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 518 aa     Download sequence    Send to blast
MMGGLLMEGM VYPGGPNYAQ LFASNDEKNL SYGSLLHQPS LGECIVGEGD LVDPPPENFA  60
EAGDEESDED IDVEELERRM WRDRMRLKRL REQQQNKNKE QGDTAKQHQS QEQARRKKMS  120
RAQDGILKYM LKMMEVCQAQ GFVYGIIPEK GKPVSGASDN LRGWWKEKVR FDRNGPAAIA  180
KYQADNAIPG SSSETIPGTV SPHSLQELQD TTLGSLLSAL MQHCDPPQRR FPLEKGVAPP  240
WWPTGREEWW PELGFPKDQG PPPYKKPHDL KKAWKVSVLT AVIKHMSPDI EKIRRLVRQS  300
KCLQDKMTAK EIATWLAVVK QEEDVYLKLH PNTCPPPSSG SAISFNSSCS DYDIEEINCD  360
FIQKRTAAEP QLMLNQRVYT CDNAKCPHHD FRQGFTDRNA RNRHQYLCNL NPVHVSDLGI  420
PSDGQKSINE LMGFYDNNVN GNKSLTLGSV SVLVQQPQFF LREDMMPFGQ QFSNQPNELS  480
GGFRFRSGLN IPAMDYSDVS QRGMGGSLQK HDGSSWFY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A6e-752013332134Protein ETHYLENE INSENSITIVE 3
4zds_B6e-752013332134Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor acting as a positive regulator in the ethylene response pathway (PubMed:16786297, PubMed:28829777, PubMed:27701783, PubMed:25995326). Required for the inhibition of root growth by ethylene in etiolated seedlings (PubMed:25995326, PubMed:28829777). Functions upstream of the auxin biosynthetic gene YUCCA8 and directly activates its expression (PubMed:28829777). Functions downstream of the ethylene signaling factor EIN2 in disease resistance against the rice blast fungus (Magnaporthe oryzae) (PubMed:27701783). Binds directly to the promoters of the NADPH oxidases RBOHA and RBOHB, and the jasmonate biosynthetic gene OPR4 to activate their expression during fungal infection (PubMed:27701783). May enhance disease resistance by facilitating reactive oxygen species (ROS) generation and jasmonate biosynthesis with subsequent phytoalexin accumulation during Magnaporthe oryzae infection (PubMed:27701783). Acts as negative regulator of salt tolerance (PubMed:25995326). During salt stress, activates the cation transporter HKT1, which mediates increased sodium uptake in roots, and contributes to sodium accumulation and salt toxicity (PubMed:25995326). Binds directly to the DNA sequence 5'-TGTTACAAATACC-3' in the promoter of the GA20OX2 gene to activate its expression at the transcriptional level during ethylene signaling (PubMed:30002253). Possesses transactivation activity in protoplasts (PubMed:25995326). {ECO:0000269|PubMed:16786297, ECO:0000269|PubMed:25995326, ECO:0000269|PubMed:27701783, ECO:0000269|PubMed:28829777, ECO:0000269|PubMed:30002253}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by infection with the fungal pathogen Magnaporthe oryzae. {ECO:0000269|PubMed:27701783}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB2663200.0AB266320.1 Musa acuminata AAA Group MA-EIL3 mRNA for ethylene signal transcription factor, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009404687.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein
SwissprotQ10M410.0EIL1A_ORYSJ; Protein ETHYLENE-INSENSITIVE 3-like 1a
TrEMBLM0T7E10.0M0T7E1_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr6P15930_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27050.11e-160ETHYLENE-INSENSITIVE3-like 1
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Yang C, et al.
    MAOHUZI6/ETHYLENE INSENSITIVE3-LIKE1 and ETHYLENE INSENSITIVE3-LIKE2 Regulate Ethylene Response of Roots and Coleoptiles and Negatively Affect Salt Tolerance in Rice.
    Plant Physiol., 2015. 169(1): p. 148-65
    [PMID:25995326]
  3. Yang C, et al.
    Activation of ethylene signaling pathways enhances disease resistance by regulating ROS and phytoalexin production in rice.
    Plant J., 2017. 89(2): p. 338-353
    [PMID:27701783]
  4. Qin H, et al.
    The activation of OsEIL1 on YUC8 transcription and auxin biosynthesis is required for ethylene-inhibited root elongation in rice early seedling development.
    PLoS Genet., 2017. 13(8): p. e1006955
    [PMID:28829777]
  5. Kuroha T, et al.
    Ethylene-gibberellin signaling underlies adaptation of rice to periodic flooding.
    Science, 2018. 361(6398): p. 181-186
    [PMID:30002253]