 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
GSMUA_Achr6P10660_001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 283aa MW: 31890.1 Da PI: 5.0999 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GSMUA_Achr6P10660_001 | genome | CIRAD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 53.6 | 3.8e-17 | 85 | 137 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+ +++ eq+++Le+ Fe + + e++ +LA+ lgL rqV +WFqNrRa++k
GSMUA_Achr6P10660_001 85 KKRLNIEQVRTLERNFELGNRLEPERKMQLARVLGLRPRQVAIWFQNRRARWK 137
4568889*********************************************9 PP
|
| 2 | HD-ZIP_I/II | 120.4 | 9.6e-39 | 83 | 173 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88
ekk+rl+ eqv++LE++Fe ++LeperK++lar Lgl+prqva+WFqnrRAR+ktkqlEk+y++Lkr+++a k+ene+L+ ++++L+
GSMUA_Achr6P10660_001 83 EKKKRLNIEQVRTLERNFELGNRLEPERKMQLARVLGLRPRQVAIWFQNRRARWKTKQLEKEYDVLKRQLEATKTENEALQVQNKKLQ 170
69************************************************************************************** PP
HD-ZIP_I/II 89 eel 91
+e+
GSMUA_Achr6P10660_001 171 AEI 173
987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 283 aa
Download sequence Send
to blast |
MACNGMASSS SFPSNFMVPM QINCGEENQL GIPVGPLLLA NLQDLRGVPP MMGKISMSFP 60
GIETGDEMTA DDDLSDDGLP AGEKKKRLNI EQVRTLERNF ELGNRLEPER KMQLARVLGL 120
RPRQVAIWFQ NRRARWKTKQ LEKEYDVLKR QLEATKTENE ALQVQNKKLQ AEILALRGGE 180
ASELINLNKE TEGSCSNRSE NSSDINLDIS RTSVTESPLP PHQTLPYFQS VRPADTDLLL 240
HSSCKPEFQC PKVENDEGSF INLLCSMGDQ PAFWPWPDHH NFH
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 131 | 139 | RRARWKTKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
