PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr6P07760_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bHLH
Protein Properties Length: 287aa    MW: 31403.7 Da    PI: 4.3013
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr6P07760_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.82.5e-102042441055
                            HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            ++RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  GSMUA_Achr6P07760_001 204 KKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 244
                            89*****************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.316194243IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.59E-14200260IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-10200249IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.8E-12200256IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.39E-12203248No hitNo description
PfamPF000101.3E-7204244IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    Send to blast
MEAEGMASEL NWSSFDPSFS VEETEEAMAQ LFGSQHMFWS DSDYDGCYSS NPDMAVTSTP  60
MNSSVGGEGN AAPWFPLGAY DQHDRPISVN EETSRDELAD AVVKPLPPPP PPPPADASQG  120
TKRRLRGGDI QIEVSRKKWK KAQNSAATAD EEDSSADINP RSSYCYGSED DSNGSRELKG  180
AVSMSSSSKG SAALNPNPQS LYAKKRRERI NERLRILQNL VPNGTKVDIS TMLEEAVQYV  240
KFLQLQIKLL SSDEMWMYAP IAYNGVSLGF DLKDPSIVSA EENDSGI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009405107.10.0PREDICTED: transcription factor bHLH84-like
TrEMBLM0T5250.0M0T525_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr6P07760_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP43103270
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.13e-32bHLH family protein