|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
GSMUA_Achr6P04170_001 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
|
Family |
Trihelix |
Protein Properties |
Length: 271aa MW: 30719.5 Da PI: 5.3665 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GSMUA_Achr6P04170_001 | genome | CIRAD | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 60.8 | 3.2e-19 | 20 | 102 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergf...erspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85
W++ e+ +Li+a+ e++ +l+rg+lk+++Weev++++ ++ g+ +++ +qC++k+e+l+kry++++ + ++ s +p+f+++
GSMUA_Achr6P04170_001 20 WSHIETTHLIDAYAERWYALKRGQLKAQQWEEVAAAVaARCGIdepSKTGTQCRHKIEKLRKRYRAERLRPGS------SVWPFFSRM 101
************************************964445544489*****************99988886......47******* PP
trihelix 86 e 86
+
GSMUA_Achr6P04170_001 102 D 102
8 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 271 aa
Download sequence Send
to blast |
MAAAGPPAAP PRRPVPGQPW SHIETTHLID AYAERWYALK RGQLKAQQWE EVAAAVAARC 60 GIDEPSKTGT QCRHKIEKLR KRYRAERLRP GSSVWPFFSR MDRMECGPLP ISARQPVPPR 120 PASAPSTDED EVEDEEEEEE EDERVGSNTR SINGILREPN WGPSRVPRNH VPATRRALEM 180 EEGESEEEES EGEDAGGNEV TSQVAAVLRG FGDGLVRMEK RRMQLMREVE RDWMQMETKR 240 AEMLRESQRC LLDMIADALP SSKKAKKSHD L
|