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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
GSMUA_Achr6P02530_001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family |
MYB |
Protein Properties |
Length: 361aa MW: 41037.3 Da PI: 7.8286 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GSMUA_Achr6P02530_001 | genome | CIRAD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 48.7 | 1.7e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+W++ Ed++l d+vk +G g+W + ++ g++R++ +c++rw++yl
GSMUA_Achr6P02530_001 14 KGSWSATEDKILTDYVKAHGEGRWGKLPKSAGLNRCPRSCRLRWLNYL 61
799*******************************************97 PP
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2 | Myb_DNA-binding | 50.7 | 4.2e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+ + eE++l+++++++lG++ W++Ia +++ gRt++++k++w+++l
GSMUA_Achr6P02530_001 67 RGNISHEEEDLIIRLHNLLGNR-WSLIAGRLP-GRTDNEIKNYWNTVL 112
78999*****************.*********.************975 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 361 aa
Download sequence Send
to blast |
MRGNPSCCKK SFNKGSWSAT EDKILTDYVK AHGEGRWGKL PKSAGLNRCP RSCRLRWLNY 60 LRPDIKRGNI SHEEEDLIIR LHNLLGNRWS LIAGRLPGRT DNEIKNYWNT VLRKKVKACS 120 VGSKKIMHSD KDEDRSSKSQ EKVICPEFEN STSCNDASVS SQHDDKNICK KESKKSVVSG 180 EIHLDTYFLG PEDCDPVMAS VIEESCTKHP LDIDFSEIFG DNLQKDMRIW GIVDAPEPPD 240 DIMLFSNGIS DSWFNGDDIQ LYGGINLESF TTLFPSESEF LGLLWECLQH IPCSNREVIW 300 LKGKTQKDHV RSSTPCQLDS QNSLDYKGTS MTIQKPQRQP HQGSKPKHAN ARIPFTTQKY 360 N
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