PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr6P00650_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family G2-like
Protein Properties Length: 379aa    MW: 41684.9 Da    PI: 8.1475
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr6P00650_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like86.23.2e-27256310155
                G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                            k r++W+p+LH+rF+ a++ LGG+++AtP++i+ lm+ +gLt+++vkSHLQkYRl
  GSMUA_Achr6P00650_001 256 KVRRCWSPDLHRRFLVALRLLGGAHVATPRQIRGLMEEDGLTNDEVKSHLQKYRL 310
                            679***************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.674253313IPR017930Myb domain
SuperFamilySSF466891.18E-13253313IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.8E-22254312IPR009057Homeodomain-like
TIGRFAMsTIGR015574.2E-23256311IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    Send to blast
MGSAAADASL ELRLFAARSV TRSLKEAPAM EKGDGRKAKL EEYVTRLEEE KRKIEAFQRE  60
LPHSMHLLTD VIDGLKKELG QCKMGESCAR VLGEFMPKKS KFEEKGAVNP EADCKEKRNW  120
MSSAQLWSDN SNRSNYEENE NEKEVLGERG EELSRPRKKE SLHLESKSLS GGSAFVPFKA  180
PPALSASTKK QEKPSITLPD LLLQASAIDN GNLTPAAVAE GRLVGDPVSE GIGRAPALAT  240
ANDRTSSQTQ QQQPRKVRRC WSPDLHRRFL VALRLLGGAH VATPRQIRGL MEEDGLTNDE  300
VKSHLQKYRL RMTSSSNAKN RPAAIGGGGW VHEEQHSASL QQSVPQSGSP ESPLRLPVAS  360
TTGDSCEEED RKSESHNCV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009403111.10.0PREDICTED: myb family transcription factor EFM-like
TrEMBLM0T3130.0M0T313_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr6P00650_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP55823353
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49560.16e-29G2-like family protein