PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr5P27670_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family EIL
Protein Properties Length: 627aa    MW: 70240.8 Da    PI: 5.0442
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr5P27670_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3505.91.9e-154724461354
                            XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                   EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegas 88 
                            eel++rmw+d+m++krlke+++++   ke+  +a+k+ +s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+gas
  GSMUA_Achr5P27670_001  72 EELERRMWRDRMRHKRLKEQQQSKN--KEQ-GDAEKQCQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGAS 156
                            8*********************965..777.99******************************************************* PP

                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S CS
                   EIN3  89 dsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtG 176
                            d+Lr+WWkekv+fdrngpaa++kyqa+n+i++ +s+ ++ +s+++hsl+elqDTtlgSLLsalmqhcdppqrrfplekg++pPWWPtG
  GSMUA_Achr5P27670_001 157 DNLRGWWKEKVRFDRNGPAAVAKYQADNAIPGFDSDFNS-GSVSPHSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGIPPPWWPTG 243
                            *************************************88.************************************************ PP

                            --HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX. CS
                   EIN3 177 kelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah. 263
                            +e ww++lg++k+qg+ppykkphdlkkawkv+vLtavikh+sp+ie+ir+l+rqsk+lqdkm++kes+++l+v++qee+++ ++++  
  GSMUA_Achr5P27670_001 244 REGWWPQLGIPKEQGPPPYKKPHDLKKAWKVGVLTAVIKHISPDIEKIRRLVRQSKCLQDKMTSKESATWLAVIKQEEDMYMKMHPCa 331
                            ************************************************************************************9998 PP

                            ..XXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX.........................XXXXXXXXXXXXXXXXXXXXX. CS
                   EIN3 264 ..ssslrkqspkvtlsceqkedvegkkeskikhvqavktta.........................gfpvvrkrkkkpsesakvsske 324
                              ++s  ++ +  +  +++++dveg +e k ++v   +  a                         ++++++kr   +se + +++++
  GSMUA_Achr5P27670_001 332 laPPSAGSGVTGAISFNSSEYDVEGIDEAKNEDVTIYNLVAdgntlnlgassgnrmfgsalmkeenDVEFIQKRA--SSECELMMNQR 417
                            7655777777777777888*****99999989999988888999******************************8..67777787775 PP

                            .....XXXXXXX.XXXXXXXXXXXXXXXXX CS
                   EIN3 325 vsrtcqssqfrgsetelifadknsisqney 354
                             ++tc++  +++++ + +f d+n++++++y
  GSMUA_Achr5P27670_001 418 -TYTCDNVLCPHNDFHSGFLDRNARNSHQY 446
                            .5**************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.2E-13072321No hitNo description
Gene3DG3DSA:1.10.3180.107.1E-74195329IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167688.11E-61200325IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001666Biological Processresponse to hypoxia
GO:0009873Biological Processethylene-activated signaling pathway
GO:0042742Biological Processdefense response to bacterium
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0000976Molecular Functiontranscription regulatory region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 627 aa     Download sequence    Send to blast
MGMLLVQDMM YPGGPNYGQI FPYNDERNVS YGGFHQLSTG ECILGEGDLV DPPPDRFAEA  60
ADEDSDEDVD IEELERRMWR DRMRHKRLKE QQQSKNKEQG DAEKQCQSQE QARRKKMSRA  120
QDGILKYMLK MMEVCKAQGF VYGIIPEKGK PVSGASDNLR GWWKEKVRFD RNGPAAVAKY  180
QADNAIPGFD SDFNSGSVSP HSLQELQDTT LGSLLSALMQ HCDPPQRRFP LEKGIPPPWW  240
PTGREGWWPQ LGIPKEQGPP PYKKPHDLKK AWKVGVLTAV IKHISPDIEK IRRLVRQSKC  300
LQDKMTSKES ATWLAVIKQE EDMYMKMHPC ALAPPSAGSG VTGAISFNSS EYDVEGIDEA  360
KNEDVTIYNL VADGNTLNLG ASSGNRMFGS ALMKEENDVE FIQKRASSEC ELMMNQRTYT  420
CDNVLCPHND FHSGFLDRNA RNSHQYICKY QNTLPPGSGM TSSSFQVPEN KPLAFPLQLN  480
TESNHPSIGS RLNPVDISEL GIPSDGQKSI DELMNFYDNS ISGSKNMNLE GVTMLEGSNS  540
HQPRIQMENN FLGQGSGIAC NLFEEVGSLM EQSRYVQENT VPFEQELASG GFMTGSGFNI  600
SEMNYSDTLH RGIGDSSQKQ DGFNWFC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A5e-761993292132Protein ETHYLENE INSENSITIVE 3
4zds_B5e-761993292132Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor acting as a positive regulator in the ethylene response pathway (PubMed:16786297, PubMed:28829777, PubMed:27701783, PubMed:25995326). Required for the inhibition of root growth by ethylene in etiolated seedlings (PubMed:25995326, PubMed:28829777). Functions upstream of the auxin biosynthetic gene YUCCA8 and directly activates its expression (PubMed:28829777). Functions downstream of the ethylene signaling factor EIN2 in disease resistance against the rice blast fungus (Magnaporthe oryzae) (PubMed:27701783). Binds directly to the promoters of the NADPH oxidases RBOHA and RBOHB, and the jasmonate biosynthetic gene OPR4 to activate their expression during fungal infection (PubMed:27701783). May enhance disease resistance by facilitating reactive oxygen species (ROS) generation and jasmonate biosynthesis with subsequent phytoalexin accumulation during Magnaporthe oryzae infection (PubMed:27701783). Acts as negative regulator of salt tolerance (PubMed:25995326). During salt stress, activates the cation transporter HKT1, which mediates increased sodium uptake in roots, and contributes to sodium accumulation and salt toxicity (PubMed:25995326). Binds directly to the DNA sequence 5'-TGTTACAAATACC-3' in the promoter of the GA20OX2 gene to activate its expression at the transcriptional level during ethylene signaling (PubMed:30002253). Possesses transactivation activity in protoplasts (PubMed:25995326). {ECO:0000269|PubMed:16786297, ECO:0000269|PubMed:25995326, ECO:0000269|PubMed:27701783, ECO:0000269|PubMed:28829777, ECO:0000269|PubMed:30002253}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00367DAPTransfer from AT3G20770Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by infection with the fungal pathogen Magnaporthe oryzae. {ECO:0000269|PubMed:27701783}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX0651340.0JX065134.1 Musa acuminata AAA Group ethylene insensitive like protein (EIL6) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009402439.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein
SwissprotQ10M410.0EIL1A_ORYSJ; Protein ETHYLENE-INSENSITIVE 3-like 1a
TrEMBLM0T2920.0M0T292_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr5P27670_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20770.11e-172EIL family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Yang C, et al.
    MAOHUZI6/ETHYLENE INSENSITIVE3-LIKE1 and ETHYLENE INSENSITIVE3-LIKE2 Regulate Ethylene Response of Roots and Coleoptiles and Negatively Affect Salt Tolerance in Rice.
    Plant Physiol., 2015. 169(1): p. 148-65
    [PMID:25995326]
  3. Yang C, et al.
    Activation of ethylene signaling pathways enhances disease resistance by regulating ROS and phytoalexin production in rice.
    Plant J., 2017. 89(2): p. 338-353
    [PMID:27701783]
  4. Qin H, et al.
    The activation of OsEIL1 on YUC8 transcription and auxin biosynthesis is required for ethylene-inhibited root elongation in rice early seedling development.
    PLoS Genet., 2017. 13(8): p. e1006955
    [PMID:28829777]
  5. Kuroha T, et al.
    Ethylene-gibberellin signaling underlies adaptation of rice to periodic flooding.
    Science, 2018. 361(6398): p. 181-186
    [PMID:30002253]