PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr5P16510_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family G2-like
Protein Properties Length: 216aa    MW: 25077.7 Da    PI: 8.3022
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr5P16510_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like22.72.2e-07159186230
                G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPk 30 
                             r +W+ + H++Fv a +qL G++kA+P+
  GSMUA_Achr5P16510_001 159 SRAVWSIDRHQKFVAADNQL-GIDKAVPQ 186
                            6999****************.*******7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011011.2881129IPR001789Signal transduction response regulator, receiver domain
SuperFamilySSF521725.69E-1529152IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23002.2E-42958No hitNo description
CDDcd001563.06E-633129No hitNo description
Gene3DG3DSA:3.40.50.23001.7E-1189151No hitNo description
Gene3DG3DSA:1.10.10.602.0E-5157186IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
MNSWSVAVEA GKEGLMGREG GQTDEFPVGM RVLAVDDDLT CLKVLEALLL RCRYHVRESS  60
MDVVVMRMKL HRWFQDSGNC EPGVGPVRLL LSVNSEIKTV MKGITHGACD YLLKPVRIEE  120
LRNIWQHVFR RKKLHHRDYS KFDNWEESHR HQNELSNHSR AVWSIDRHQK FVAADNQLGI  180
DKAVPQEDTR AHQCREAYKR KCCESFTGML LNYLQS
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018681645.16e-94PREDICTED: LOW QUALITY PROTEIN: two-component response regulator ORR22-like
SwissprotB8AEH11e-47ORR23_ORYSI; Two-component response regulator ORR23
SwissprotQ6K8X61e-47ORR23_ORYSJ; Two-component response regulator ORR23
TrEMBLM0SZ301e-161M0SZ30_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr5P16510_0011e-162(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18563894
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.14e-37response regulator 12
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]