PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr5P14150_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 402aa    MW: 43009.5 Da    PI: 6.1963
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr5P14150_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_173.14e-23295357163
                            XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                            e+elkr+rrkq+NRe+ArrsR+RK+ae eeL+++v++L++eN+aL+ e++++kke+++l s++
  GSMUA_Achr5P14150_001 295 ERELKRQRRKQSNRESARRSRLRKQAEYEELAQRVEVLKEENTALRAEVDRIKKEYDELLSQN 357
                            89**********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077773.2E-29195IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.1E-46134259No hitNo description
Gene3DG3DSA:1.20.5.1702.4E-17288355No hitNo description
SMARTSM003386.5E-22295359IPR004827Basic-leucine zipper domain
PfamPF001701.2E-21295357IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.829297360IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.5E-11298355No hitNo description
CDDcd147026.62E-25300351No hitNo description
PROSITE patternPS000360302317IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    Send to blast
MGGSETDCKG AKTSATQEQP PAASSSPGAA VYPDWSGFQA YSPVLPHGFF HSPVVSSPQS  60
HPYMWGAQHL MPHYGTPPPP YVMYPHGIYA HPSMPPGSHP FSPYAMTPPN GNAEACGSVP  120
ASTGGDAKSS EGKERNPIQR SKGSLGSLNM ITGKNNNELD KGAANGVFSR SGDSESEGSS  180
EGSDTNSHND SEPKTGDGHS PLDETSLNGT SGVITAPSHQ MVPIMPMLAA GVPAAVAGPT  240
TNLNIGMDYW VAPTPSVIPP VRGKVPATTN AGATIPGTLV GSSEKVPSEI WLQDERELKR  300
QRRKQSNRES ARRSRLRKQA EYEELAQRVE VLKEENTALR AEVDRIKKEY DELLSQNTAL  360
QKKIEEKTKE DAIVEMNRQQ AEDKNLDSDP QAGQLDGKHS GH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1311317RRSRLRK
2311318RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009400763.10.0PREDICTED: bZIP transcription factor 16-like isoform X1
RefseqXP_018682335.10.0PREDICTED: bZIP transcription factor 16-like isoform X1
SwissprotQ501B21e-125BZP16_ARATH; bZIP transcription factor 16
TrEMBLM0SYE40.0M0SYE4_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr5P14150_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21473796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-104basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]