PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GSMUA_Achr5P05690_001

Organism

Musa acuminata

Taxonomic ID

4641

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa

Family

bZIP

Protein Properties

Length: 407aa MW: 43180.9 Da PI: 10.2477

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GSMUA_Achr5P05690_001	genome	CIRAD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	46.1	1e-14	329	379	5	55
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++ N++L+k+ e++ ++ GSMUA_Achr5P05690_001 329 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKELNEELQKKQEKMMDM 379 79****************************************999988877 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.8E-12	325	389	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.887	327	376	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.1E-14	329	378	No hit	No description
CDD	cd14707	3.77E-27	329	383	No hit	No description
SuperFamily	SSF57959	1.13E-10	329	378	No hit	No description
Pfam	PF00170	1.3E-12	329	380	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	332	347	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence Send to blast
MNFNKHSMMG DGGGGGSGAE AKGGGGLARQ TSVYSLTLDE FQSTLGGLGK DFGSMNMDEL 60 LKNIWTAEES QVMAAVAAPV LDAGLQRQGS FTLPRTLSQK TVDEVWRGLV CLPQNPPAAA 120 VAGVSHHQRQ PTLGEMTLEE FLVRAGVVRE QPAAPSTSLP QRLNGDHSNN GNSNNNAISN 180 VLFGDPPVAN NASSLALGFT QASRNSRDVV LTNPIANSSV TNLPMMATAE PSQFVVPHGA 240 VDLGNPQRNR GGGLVGIGDA GLKNGLMSGA VGLGTVAGTV AVGSPANHLA SDALRKSGGD 300 LSSVSPVPYA FGGGLRGRKP SAVEKVLERR QRRMIKNRES AARSRARKQA YTMELEAEVA 360 KLKELNEELQ KKQEKMMDMQ KHQVFEIINQ QRGPKKLCLR RTQTGPW

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence Send to blast

MNFNKHSMMG DGGGGGSGAE AKGGGGLARQ TSVYSLTLDE FQSTLGGLGK DFGSMNMDEL  60
LKNIWTAEES QVMAAVAAPV LDAGLQRQGS FTLPRTLSQK TVDEVWRGLV CLPQNPPAAA  120
VAGVSHHQRQ PTLGEMTLEE FLVRAGVVRE QPAAPSTSLP QRLNGDHSNN GNSNNNAISN  180
VLFGDPPVAN NASSLALGFT QASRNSRDVV LTNPIANSSV TNLPMMATAE PSQFVVPHGA  240
VDLGNPQRNR GGGLVGIGDA GLKNGLMSGA VGLGTVAGTV AVGSPANHLA SDALRKSGGD  300
LSSVSPVPYA FGGGLRGRKP SAVEKVLERR QRRMIKNRES AARSRARKQA YTMELEAEVA  360
KLKELNEELQ KKQEKMMDMQ KHQVFEIINQ QRGPKKLCLR RTQTGPW

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009399710.1	0.0	PREDICTED: bZIP transcription factor TRAB1 isoform X1
Swissprot	Q9M7Q4	1e-100	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	M0SVZ8	0.0	M0SVZ8_MUSAM; Uncharacterized protein
STRING	GSMUA_Achr5P05690_001	0.0	(Musa acuminata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP706	38	147

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19290.2	1e-43	ABRE binding factor 4

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]