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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GSMUA_Achr5P05350_001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family | bZIP | ||||||||
Protein Properties | Length: 164aa MW: 18944.4 Da PI: 11.0501 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 40.5 | 6.1e-13 | 68 | 127 | 3 | 62 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 e +r rr+++NRe+ArrsR RK++++ eL v +L + N L +el++ + e + + e GSMUA_Achr5P05350_001 68 EERRKRRMISNRESARRSRMRKQKRLSELWSQVIQLRSANCHLLDELNRVRRERVQITHE 127 6789*********************************************99988777666 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.2E-12 | 66 | 130 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.289 | 68 | 131 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.9E-10 | 68 | 124 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.0E-10 | 70 | 123 | No hit | No description |
SuperFamily | SSF57959 | 3.3E-11 | 70 | 122 | No hit | No description |
CDD | cd14702 | 8.64E-16 | 71 | 120 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 73 | 88 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence Send to blast |
MHPGEIAGIC YLSPSSSASL RAHYSMSQNN ITSSQFSSLF GPYIAQQFQT EPTMHGFGAV 60 GHQLSAAEER RKRRMISNRE SARRSRMRKQ KRLSELWSQV IQLRSANCHL LDELNRVRRE 120 RVQITHENDR LRVEETELHK RLGNLIPEFA CAPRRADQSR FHGS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 69 | 90 | RRKRRMISNRESARRSRMRKQK |
2 | 82 | 89 | RRSRMRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009400114.1 | 1e-117 | PREDICTED: uncharacterized protein LOC103984352 | ||||
TrEMBL | M0SVW4 | 1e-117 | M0SVW4_MUSAM; Uncharacterized protein | ||||
STRING | GSMUA_Achr5P05350_001 | 1e-118 | (Musa acuminata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1186 | 35 | 126 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G04038.1 | 4e-21 | basic leucine-zipper 48 |