PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GSMUA_Achr4P31020_001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family | BES1 | ||||||||
Protein Properties | Length: 259aa MW: 28051 Da PI: 6.5077 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 208.5 | 1.8e-64 | 2 | 149 | 1 | 148 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssas 87 ++++r+ptw+ErEnn+rRERrRRa+aakiy+GLR++Gnyklpk++DnneVlkALc eAGw ve+DGttyrkg+kp+ e+++++g s+s GSMUA_Achr4P31020_001 2 TSGTRMPTWRERENNRRRERRRRAVAAKIYTGLRMYGNYKLPKHCDNNEVLKALCDEAGWSVEPDGTTYRKGCKPPaEHMDIVGGSNS 89 5899************************************************************************************ PP DUF822 88 aspesslqsslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvss 148 sp ss q s+ +s+ +sp++s+ asp+sss+ ++ +si++a+a+sl+p+l++ls++s GSMUA_Achr4P31020_001 90 HSPYSSNQPSPCTSYNPSPASSSYASPASSSYIVATN-NSINAADANSLIPWLKNLSSAST 149 ******9977777777777777777777777776666.44555667*********998554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 2.9E-68 | 3 | 145 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence Send to blast |
MTSGTRMPTW RERENNRRRE RRRRAVAAKI YTGLRMYGNY KLPKHCDNNE VLKALCDEAG 60 WSVEPDGTTY RKGCKPPAEH MDIVGGSNSH SPYSSNQPSP CTSYNPSPAS SSYASPASSS 120 YIVATNNSIN AADANSLIPW LKNLSSASTS DLTSSPTAQT PHIKFIPDPA WIAGLQIETV 180 MWTPGQSGTS SPALPGMPHN VGIQMSDGIS QEFAFGSSAT DDNPIATLVK PWEGERIHEE 240 CGSDDLELTL GSSRTRADS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 8e-25 | 6 | 76 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 8e-25 | 6 | 76 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 8e-25 | 6 | 76 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 8e-25 | 6 | 76 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009397454.1 | 1e-147 | PREDICTED: protein BZR1 homolog 2-like | ||||
Swissprot | Q9ZV88 | 3e-80 | BEH4_ARATH; BES1/BZR1 homolog protein 4 | ||||
TrEMBL | M0STL4 | 0.0 | M0STL4_MUSAM; Uncharacterized protein | ||||
STRING | GSMUA_Achr4P31020_001 | 0.0 | (Musa acuminata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1366 | 38 | 112 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18890.1 | 5e-65 | BES1/BZR1 homolog 3 |