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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GSMUA_Achr4P28810_001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family |
LBD |
Protein Properties |
Length: 295aa MW: 32042 Da PI: 5.5642 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GSMUA_Achr4P28810_001 | genome | CIRAD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 118.4 | 4.2e-37 | 17 | 118 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqq.q 86
+CaaCk+++rkC+k+C++apyf ae+ +++fa+vhklFGasnv+kll ++p ++r da+++l+yeA+ar+rdPvyG+v++i++lqq q
GSMUA_Achr4P28810_001 17 RCAACKTMKRKCVKGCIFAPYFDAERgAARFAAVHKLFGASNVSKLLLQIPIDKRVDAIATLCYEAQARLRDPVYGCVAHIFALQQqQ 104
6***********************9989*******************************************************97626 PP
DUF260 87 leqlkaelallkee 100
+ +l+ael+ l+++
GSMUA_Achr4P28810_001 105 VVNLRAELSILQTQ 118
899*****999987 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 295 aa
Download sequence Send
to blast |
MDSNTYSSQL GGGSGGRCAA CKTMKRKCVK GCIFAPYFDA ERGAARFAAV HKLFGASNVS 60 KLLLQIPIDK RVDAIATLCY EAQARLRDPV YGCVAHIFAL QQQQVVNLRA ELSILQTQLE 120 ALQELPLPPV PTFPSPTPFS SILPTTWGLS DVEAPLVQPS RQQHQLWTDG THLLAISGGG 180 DGVVANCSYA QENLLTGRPP SSSPSTADLS TFVAPDLVQP ASLHQQQHQL WSFRTNLPDG 240 MNYEENFLSG TDRLPPTILP TTGDRTARQH EPQQLWADGT SPSDGSGGDD GEWWW
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