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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
GSMUA_Achr4P21900_001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
|
| Family |
NAC |
| Protein Properties |
Length: 187aa MW: 21728.3 Da PI: 8.984 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GSMUA_Achr4P21900_001 | genome | CIRAD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 135.7 | 3.1e-42 | 11 | 138 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratk..sgyWkat 86
p+Gf+F Ptd el+ +yL++k++g++l+ +++++v++y+++P dL +k++ +e +w+fF++r++ky++g r+nr+t +gyWkat
GSMUA_Achr4P21900_001 11 PAGFHFVPTDGELIGHYLRAKLDGEDLQY-KAFNDVKLYDYHPADLVEKYEDyGEGRWFFFTSRERKYPNGIRPNRTTCdgDGYWKAT 97
89**************************9.88**************8655553666********************8876689***** PP
NAM 87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
g++k ++ +++ vg++++Lvfy+g+a +g+ktdW+m+ey+
GSMUA_Achr4P21900_001 98 GTEKIIYY-NRKPVGIRRSLVFYTGKAGNGQKTDWIMQEYTT 138
******99.999****************************85 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 187 aa
Download sequence Send
to blast |
MERRGPISQF PAGFHFVPTD GELIGHYLRA KLDGEDLQYK AFNDVKLYDY HPADLVEKYE 60
DYGEGRWFFF TSRERKYPNG IRPNRTTCDG DGYWKATGTE KIIYYNRKPV GIRRSLVFYT 120
GKAGNGQKTD WIMQEYTTKS TSNKPHRNSD GSHQPHRNSD GSMQVSIIFK ICFRLDSSMI 180
NGCNDIW
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-36 | 1 | 136 | 6 | 140 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-36 | 1 | 136 | 6 | 140 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-36 | 1 | 136 | 6 | 140 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-36 | 1 | 136 | 6 | 140 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-36 | 1 | 136 | 9 | 143 | NAC domain-containing protein 19 |
| 3swm_B | 1e-36 | 1 | 136 | 9 | 143 | NAC domain-containing protein 19 |
| 3swm_C | 1e-36 | 1 | 136 | 9 | 143 | NAC domain-containing protein 19 |
| 3swm_D | 1e-36 | 1 | 136 | 9 | 143 | NAC domain-containing protein 19 |
| 3swp_A | 1e-36 | 1 | 136 | 9 | 143 | NAC domain-containing protein 19 |
| 3swp_B | 1e-36 | 1 | 136 | 9 | 143 | NAC domain-containing protein 19 |
| 3swp_C | 1e-36 | 1 | 136 | 9 | 143 | NAC domain-containing protein 19 |
| 3swp_D | 1e-36 | 1 | 136 | 9 | 143 | NAC domain-containing protein 19 |
| 4dul_A | 1e-36 | 1 | 136 | 6 | 140 | NAC domain-containing protein 19 |
| 4dul_B | 1e-36 | 1 | 136 | 6 | 140 | NAC domain-containing protein 19 |
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