PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GSMUA_Achr4P19440_001

Organism

Musa acuminata

Taxonomic ID

4641

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa

Family

G2-like

Protein Properties

Length: 176aa MW: 20292.7 Da PI: 10.6861

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GSMUA_Achr4P19440_001	genome	CIRAD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	20.5	1.1e-06	115	131	39	55
G2-like 39 kgLtlehvkSHLQkYRl 55 kgL l h+kSHLQkYR+ GSMUA_Achr4P19440_001 115 KGLKLFHLKSHLQKYRS 131 89**************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	5.1E-5	115	132	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 176 aa Download sequence Send to blast
MITWIADAVT GLSSFCSCLL AQLQLIPESS CTFQMLLKME FFFPKESSWV TELHRMCHHL 60 PKLMAATITL LLDMDIDGFY SSLAWRSSIR RRRRPARGPR KSNTKGYHAN DGCYKGLKLF 120 HLKSHLQKYR SGKQSGKEMT EQSKDGRSRS SSFVLSLLNT LSAHSIIFPK RFQRIW

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	M0SQA7	1e-128	M0SQA7_MUSAM; Uncharacterized protein
STRING	GSMUA_Achr4P19440_001	1e-128	(Musa acuminata)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24120.1	2e-09	G2-like family protein