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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GSMUA_Achr4P16120_001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family |
bHLH |
Protein Properties |
Length: 457aa MW: 50413.9 Da PI: 6.2456 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GSMUA_Achr4P16120_001 | genome | CIRAD | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 31.3 | 3.7e-10 | 293 | 340 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq
GSMUA_Achr4P16120_001 293 THSLAERVRREKISERMKLLQDLVPGC----SKATGKAVMLDEIIDYVQSLQ 340
8*************************9....7779****************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 457 aa
Download sequence Send
to blast |
MSSGPSNQLL QCFLNLNSDH SIDPDTQLGS AMSSFMSSQS SNSAAPAKSC SFRELGARLQ 60 RIDDSSEEVS PRSRFTDASG NSSPKGDLSK LDNVRRHLPQ AMGGLTIAGN LALAHLDQFA 120 ACPGFVESAA RFSSLDDQDR CWRSSHLELP GNAVLHSSVA SNQFPTVRYA ELWNSREETS 180 VSDPISVSGE ASLGAPRDSN AKKRKAPLKS KEKDTIQPKS VIDPPKVADE EDSDAKRWRS 240 TGNNNEIGNE QNDGARTRGN SEEKQERESN DKPSEPPKDY VHVRARRGQA TDTHSLAERV 300 RREKISERMK LLQDLVPGCS KATGKAVMLD EIIDYVQSLQ RQVEFLSMKL ATVNPELDFN 360 NLANFRANDM IQICRPVPDS VYQVEMSMAS SHAKQPQQRN RISSHCFMNM LDPTCHLSLI 420 AHQAYLNGIG DASSQLGTFW EDDLQSVASF WNFHGGT
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 195 | 204 | PRDSNAKKRK |