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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
GSMUA_Achr4P06820_001 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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| Family |
LBD |
| Protein Properties |
Length: 234aa MW: 24839.2 Da PI: 5.1374 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GSMUA_Achr4P06820_001 | genome | CIRAD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 99.7 | 2.9e-31 | 4 | 107 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilkl 83
+C++C+vlr++C+++C ++p++ +++q++++ +++k++G++ +l+l++a pe+ r+++++sl+yeA+ r+ +P+yG+vg+++++
GSMUA_Achr4P06820_001 4 SCNGCRVLRKGCSDNCSIRPCLqwiksCESQANATVFLAKFYGRAGLLNLINAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSG 91
6************************9999*********************************************************** PP
DUF260 84 qqqleqlkaelallke 99
++ql+q+++e++l ++
GSMUA_Achr4P06820_001 92 SWQLCQAAVEAVLKGA 107
**********998766 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 234 aa
Download sequence Send
to blast |
MRMSCNGCRV LRKGCSDNCS IRPCLQWIKS CESQANATVF LAKFYGRAGL LNLINAGPEH 60
LRPAIFRSLL YEACGRIVNP IYGSVGLLWS GSWQLCQAAV EAVLKGAPIA QIPIEMAAST 120
PAPPLKACDI RHVSKGSGAA RAAAELHKDG ECRENESMSS ADTVEEEASH VSQGEPDSAE 180
EDEVGLELTL GFEPVSRPTP ARRPRSGVDG RCDLSATDMG ECTADLGLAL PAAP
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