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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
GSMUA_Achr4P05720_001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
|
| Family |
SBP |
| Protein Properties |
Length: 346aa MW: 38500.1 Da PI: 9.6074 |
| Description |
SBP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GSMUA_Achr4P05720_001 | genome | CIRAD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | SBP | 130.1 | 7.9e-41 | 55 | 132 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78
+CqvegC+ dls akeyhr+h+vCe+hsk p+v+v+g+e+rfCqqCsrfh+lsefD++krsCrrrL++hn+rrrk+++
GSMUA_Achr4P05720_001 55 CCQVEGCNIDLSGAKEYHRKHRVCETHSKFPKVIVAGQERRFCQQCSRFHDLSEFDQKKRSCRRRLSDHNARRRKPRP 132
6**************************************************************************875 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 346 aa
Download sequence Send
to blast |
MDWNANASLL WDWDNHAPFG GNYKLSAAAA AAGGGGASSG SELARVSYQS AHSTCCQVEG 60
CNIDLSGAKE YHRKHRVCET HSKFPKVIVA GQERRFCQQC SRFHDLSEFD QKKRSCRRRL 120
SDHNARRRKP RPNIISFNST TFSPSVYNDK YQMNMLWNKS PFGHMKPVAT TTSEASQKFK 180
LAQMRGSWVK SSKESSMYGQ LHMPDTQLPN GFTALYHDVD KPLPLKGTAA EVLNQGSEAS 240
AGASNLDRAP DLRRALSLLS TSSWGSPDPR GNGQTPFIIM DAKHASSAQP TVPVANPSNH 300
WIYGEPVSQQ AQPLLFSMHR NGNQTQEFQL PKAPYRDTFF DPTQIY
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 111 | 128 | KKRSCRRRLSDHNARRRK |
