 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
GSMUA_Achr4P01350_001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 255aa MW: 28225.9 Da PI: 8.2837 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GSMUA_Achr4P01350_001 | genome | CIRAD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 57.7 | 1.9e-18 | 114 | 168 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ ++tkeq Le+ F+++ ++ ++++ LAk+l+L rqV vWFqNrRa+ k
GSMUA_Achr4P01350_001 114 RKKLRLTKEQSAMLENRFKEHTSLNPKQKQALAKQLNLRPRQVEVWFQNRRARTK 168
678899***********************************************98 PP
|
| 2 | HD-ZIP_I/II | 120.9 | 6.6e-39 | 114 | 201 | 1 | 88 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88
+kk+rl+keq+++LE+ F+e++ L+p++K++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e L+r+y++l++en+rL+ke +e++
GSMUA_Achr4P01350_001 114 RKKLRLTKEQSAMLENRFKEHTSLNPKQKQALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEILRRCYEKLTAENQRLRKELQEMK 201
69***********************************************************************************998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 255 aa
Download sequence Send
to blast |
MDINNSQDIR ETALSLGLGV GPTTTTSAEH LRPREPCSPL TNLASDQPSL ALSLSTDAYA 60
ETAKAKEESR PAPASSSRSA VSSFSSPHAT IVLREKDVGS DEAEEDEEDN GCVRKKLRLT 120
KEQSAMLENR FKEHTSLNPK QKQALAKQLN LRPRQVEVWF QNRRARTKLK QTEVDCEILR 180
RCYEKLTAEN QRLRKELQEM KSLRFSAPSP LYMQIPAATL ALCPSCQRIN GSEAGSDAAP 240
KPGLFLNPIT HPAPC
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 162 | 170 | RRARTKLKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}. |
| UniProt | INDUCTION: In leaves by drought stress. {ECO:0000269|PubMed:17999151}. |
