 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
GSMUA_Achr3P29620_001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
|
| Family |
Dof |
| Protein Properties |
Length: 285aa MW: 30611.7 Da PI: 8.7316 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GSMUA_Achr3P29620_001 | genome | CIRAD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 124.2 | 4.2e-39 | 24 | 84 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
+e+ lkcprCds+ntkfCyynnysl+qPr++CkaCrryWtkGGalrnvP+Ggg+rknk+s+
GSMUA_Achr3P29620_001 24 PEQGLKCPRCDSSNTKFCYYNNYSLAQPRHYCKACRRYWTKGGALRNVPIGGGCRKNKRSR 84
7899******************************************************986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0010052 | Biological Process | guard cell differentiation |
| GO:0010118 | Biological Process | stomatal movement |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:1902066 | Biological Process | regulation of cell wall pectin metabolic process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 285 aa
Download sequence Send
to blast |
MMADDSHASG GSKSTATAAE LQQPEQGLKC PRCDSSNTKF CYYNNYSLAQ PRHYCKACRR 60
YWTKGGALRN VPIGGGCRKN KRSRSSTTSR LSLPSFSPGF QVGVLPFSGL HSLAASDVFN 120
GNQCISFGDM ISSPGVYSDT GGCSSSVGKS HANNSIAPSI ESLSSINQDL HWKLQQQRLA 180
IFFGGQTHTD SSSSRSSMPA YPTPSSKDAG LEGNESTKVR VSSEHNTSPV WFIESSSYTI 240
PLATTTTTNT TTIMTNNNNG SNNTSTWNGT PWPAWSDMPQ FGTLP
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | JN393719 | 2e-38 | JN393719.1 Sorghum bicolor clone Sbdof25 Dof (Dof) gene, partial cds. |
