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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
GSMUA_Achr3P29520_001 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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| Family |
LBD |
| Protein Properties |
Length: 233aa MW: 24778 Da PI: 4.5386 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GSMUA_Achr3P29520_001 | genome | CIRAD | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 101.4 | 8.6e-32 | 4 | 107 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilkl 83
+C++C+vlr++C+++C ++p++ p++q++++ +++k++G++ +++l++a p++ r+++++sl+yeA+ r+ +P+yG+vg+++++
GSMUA_Achr3P29520_001 4 SCNGCRVLRKGCSENCSIRPCLqwiknPESQANATVFLAKFYGRAGLMNLINAGPDHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSG 91
6*************************************************************************************** PP
DUF260 84 qqqleqlkaelallke 99
++ql+q+++e++l ++
GSMUA_Achr3P29520_001 92 SWQLCQAAVEAVLKGS 107
**********998776 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 233 aa
Download sequence Send
to blast |
MRMSCNGCRV LRKGCSENCS IRPCLQWIKN PESQANATVF LAKFYGRAGL MNLINAGPDH 60
LRPAIFRSLL YEACGRIVNP IYGSVGLLWS GSWQLCQAAV EAVLKGSPIV QIPSETVASI 120
PAPPLKAYDI RHSVASDATV PVTPSAAAGG EDGECRENEC MSSADTAEEA SHVSQGEPEQ 180
PDEDEVGLEL TLGFEPVSSE PAPRPAPEAR RHLSCWDADA CTADLGLALP ATS
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