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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
GSMUA_Achr3P21430_001 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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| Family |
HD-ZIP |
| Protein Properties |
Length: 266aa MW: 29745.5 Da PI: 6.9205 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GSMUA_Achr3P21430_001 | genome | CIRAD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 57.3 | 2.7e-18 | 83 | 136 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++ eq+++Le+ Fe +++ e++ +LA lgL rqV +WFqNrRa++k
GSMUA_Achr3P21430_001 83 KKRRLNVEQVRTLEKSFELGNKLEPERKMQLAVALGLRPRQVAIWFQNRRARWK 136
4568999**********************************************9 PP
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| 2 | HD-ZIP_I/II | 127.9 | 4.3e-41 | 82 | 171 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88
ekkrrl+ eqv++LE+sFe +kLeperK++la +Lgl+prqva+WFqnrRAR+ktkqlEkdy++L+r++da+k+ene+L++++++L+
GSMUA_Achr3P21430_001 82 EKKRRLNVEQVRTLEKSFELGNKLEPERKMQLAVALGLRPRQVAIWFQNRRARWKTKQLEKDYDVLRRQFDAIKAENEALQAHNKKLQ 169
69*************************************************************************************9 PP
HD-ZIP_I/II 89 ee 90
+e
GSMUA_Achr3P21430_001 170 TE 171
65 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 266 aa
Download sequence Send
to blast |
MSCNGMASSF FPSGFMFQLQ APCEDDHQLV SPVRSLIPTN LHHLRGVAPA TGKRSASFSG 60
AETCEEANGD DELSDDASLA GEKKRRLNVE QVRTLEKSFE LGNKLEPERK MQLAVALGLR 120
PRQVAIWFQN RRARWKTKQL EKDYDVLRRQ FDAIKAENEA LQAHNKKLQT EALALRGREA 180
SDLINLNKET EGSCSNRSEN SSEINLDISR TSVAERSSTT SVGRTVEITA AFSSLVELYC 240
NLMFGVQVPD VERRTLEGIN KETRVL
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| Nucleic Localization
Signal ? help
Back to Top |
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| No. |
Start |
End |
Sequence |
| 1 | 130 | 138 | RRARWKTKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| UniProt | Probable transcription factor that may act in the sucrose-signaling pathway. {ECO:0000269|PubMed:11292072}. |
| Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Ribone PA,Capella M,Chan RL
Functional characterization of the homeodomain leucine zipper I transcription factor AtHB13 reveals a crucial role in Arabidopsis development.
J. Exp. Bot., 2015. 66(19): p. 5929-43
[PMID:26136262] - Wang X, et al.
Overexpressed BRH1, a RING finger gene, alters rosette leaf shape in Arabidopsis thaliana.
Sci China Life Sci, 2018. 61(1): p. 79-87
[PMID:28887625] - Ebrahimian-Motlagh S, et al.
JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13.
Front Plant Sci, 2017. 8: p. 2118
[PMID:29326734]
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