PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr3P12290_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 500aa    MW: 53928.9 Da    PI: 7.3496
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr3P12290_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1322.7e-10339396562
                            CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                            kr +r   NR +A rs +RK  +i eLe kv++L++e ++L  +l  l+  +a l+ +
  GSMUA_Achr3P12290_001 339 KRVKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSAGLTCQ 396
                            899*******************************************999988877655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.5E-18335399IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.576337400IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.62E-11339390No hitNo description
Gene3DG3DSA:1.20.5.1701.5E-11339394No hitNo description
PfamPF001703.2E-9339394IPR004827Basic-leucine zipper domain
CDDcd147031.21E-22340391No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 500 aa     Download sequence    Send to blast
MGEAEAATRN DLMQRLKPSA ASTSSCSAAA PPKAPNSASF FRHFAPNSFG PEASRRPGIP  60
PIPPPPSPSS AAAAVRPPSP ISSASAAFHS RSLSQPPAFF SLDSLPPPLS PPAFAGATSD  120
ASLADRARPV SAGLPPRKAH RRSQSDVPIG FLQSFSSSSS SSSPSSAEGT GDRKEDAGDA  180
ADDLFNAYMN LDSLDALNSS GMEERHEDFD SSRLSGARMS ATETSENEAE SSVNESSGGG  240
VKKEGNKRSA AGDLTPISMR HCRSLSMDSF MGKLNFGDEL PKLLPSPGIQ MPHLLRSGSM  300
DRTANTLSLE FGNGEFSSAE IKKIMANEKL AEMAITDPKR VKRILANRQS AARSKERKMR  360
YISELEHKVQ TLQTEATTLS AQLTLLQRDS AGLTCQNNEL RIRLQAMEQQ AQLRDAINEA  420
LTAEVQRLKL ATGEITEAQL SKTINQQLAT SSQMFHLHQL QSQQQNQQST HVPLYQFQQP  480
QQQQQQQQQN NTASEVESKN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009391940.10.0PREDICTED: probable transcription factor PosF21
TrEMBLM0SDZ60.0M0SDZ6_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr3P12290_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62473650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.34e-82bZIP family protein