PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr3P11150_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 414aa    MW: 46845.5 Da    PI: 7.1263
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr3P11150_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.22.6e-11124162543
                            CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43 
                            k  rr+++NReAAr+sR+RKka+i++Le+   +L+   +
  GSMUA_Achr3P11150_001 124 KTLRRLAQNREAARKSRLRKKAYIQQLETSRIKLTHLEQ 162
                            7789************************87666665555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.3E-10114166No hitNo description
SMARTSM003383.8E-9120205IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.117122166IPR004827Basic-leucine zipper domain
PfamPF001701.8E-8124164IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.18E-7124166No hitNo description
CDDcd147084.85E-21124176No hitNo description
PROSITE patternPS000360127142IPR004827Basic-leucine zipper domain
PfamPF141441.6E-30214288IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    Send to blast
MYLDGQDHSS SPAQEQRRES FHSITVTCNE QLMITLETLN IFPSQPMHVE PSTKVRRGGM  60
SLDSPASSGS KKSSDQAMEL TSYHPSLSEL SSLHVLVVYI MLSFWLQKEG NGKGTSGSKT  120
SDPKTLRRLA QNREAARKSR LRKKAYIQQL ETSRIKLTHL EQELQRARSQ GLSFGGGALL  180
EDQGLPAVVG GLSADAAMFD MEYMRWLEEH HRLMCELRAA VQEHQPENHL RMFVDSCLAH  240
HDQMVNLKNI VIRSDVFHLI SGVWMTPAER CFMWMGGFRP SELIKMLLSH MEPLTEEQIL  300
GVCGLQQSTQ ETEEALSQGL EALNQSLSDT ITSDALSYPS NVADYMGQMA MAMNKLTTLE  360
GFIRQADNLR QQTLHRLYQI LTTRQMARSL LAIAEYCHRL RALSSLWLAR PRHE
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009391826.10.0PREDICTED: transcription factor TGA2.3 isoform X5
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLM0SDN20.0M0SDN2_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr3P11150_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP78763543
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-144bZIP family protein