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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GSMUA_Achr3P09440_001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
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Family | EIL | ||||||||
Protein Properties | Length: 529aa MW: 59953.6 Da PI: 6.6366 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 432.8 | 3.4e-132 | 69 | 332 | 1 | 264 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegas 88 eel++r wkd+m+lkrlke+++++ ke + +a+k+++s+eqarrkkm raQDgiLk Mlk mevcnaqGfvYgi e+gkpv+gas GSMUA_Achr3P09440_001 69 EELEHRVWKDRMRLKRLKEQQQHKH--KELQGEASKQRQSQEQARRKKMCRAQDGILKNMLKLMEVCNAQGFVYGILLENGKPVSGAS 154 8*********************976..88889******************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S CS EIN3 89 dsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtG 176 d+LraWWkekv+fd ngpaai+kyqa+ +i+ ++s+l + ++++ sl+elqDTtlgSLLsalmqhc+ppqrrfplekg++pPWWPtG GSMUA_Achr3P09440_001 155 DNLRAWWKEKVRFDWNGPAAIAKYQADTAISRSSSELYS-ETASLRSLQELQDTTLGSLLSALMQHCNPPQRRFPLEKGIAPPWWPTG 241 ********************************9999966.999********************************************* PP --HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX. CS EIN3 177 kelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah. 263 +e+ww++ g+++dqg+ppykkphdlkkawkv vLt+vikh+sp++++i +l+rqsk+lqdkm+akes+++l+v++qee+++++++++ GSMUA_Achr3P09440_001 242 NEEWWQQPGIPNDQGPPPYKKPHDLKKAWKVCVLTSVIKHISPNMDKIHRLVRQSKCLQDKMTAKESATWLAVIKQEEDMYRKLHPDa 329 *************************************************************************************995 PP ..X CS EIN3 264 ..s 264 + GSMUA_Achr3P09440_001 330 ciP 332 542 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 3.9E-124 | 69 | 319 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 4.5E-71 | 195 | 329 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 7.98E-59 | 199 | 323 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 529 aa Download sequence Send to blast |
MMGGLSMEDI VCRTRPNQVQ NLPSMDEKNF IYGSLHQPER NGQGDPTEPP QEKLAEANDE 60 ENDEDIDIEE LEHRVWKDRM RLKRLKEQQQ HKHKELQGEA SKQRQSQEQA RRKKMCRAQD 120 GILKNMLKLM EVCNAQGFVY GILLENGKPV SGASDNLRAW WKEKVRFDWN GPAAIAKYQA 180 DTAISRSSSE LYSETASLRS LQELQDTTLG SLLSALMQHC NPPQRRFPLE KGIAPPWWPT 240 GNEEWWQQPG IPNDQGPPPY KKPHDLKKAW KVCVLTSVIK HISPNMDKIH RLVRQSKCLQ 300 DKMTAKESAT WLAVIKQEED MYRKLHPDAC IPPSSCSGIT GNNMEIIRKR SVAEAEPVLN 360 QCIYTCANVQ CPHNDLRHGF LDRNARNSHQ YHCQYQNTLP QGIGAAFNTQ PNLTSLISGL 420 DPIDISDLGI PPDAQKSIND LMSYYDHNLN DTKSFSSGGI PPLQQQQQQF SLHEDAMPFE 480 QQLGNQSNGM GGEFGFASAF IAPTMDHAGA LHGKMEDPLH KAEASHWFY |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 2e-68 | 200 | 329 | 5 | 134 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 2e-68 | 200 | 329 | 5 | 134 | Protein ETHYLENE INSENSITIVE 3 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor acting as a positive regulator in the ethylene response pathway (PubMed:16786297, PubMed:28829777, PubMed:27701783, PubMed:25995326). Required for the inhibition of root growth by ethylene in etiolated seedlings (PubMed:25995326, PubMed:28829777). Functions upstream of the auxin biosynthetic gene YUCCA8 and directly activates its expression (PubMed:28829777). Functions downstream of the ethylene signaling factor EIN2 in disease resistance against the rice blast fungus (Magnaporthe oryzae) (PubMed:27701783). Binds directly to the promoters of the NADPH oxidases RBOHA and RBOHB, and the jasmonate biosynthetic gene OPR4 to activate their expression during fungal infection (PubMed:27701783). May enhance disease resistance by facilitating reactive oxygen species (ROS) generation and jasmonate biosynthesis with subsequent phytoalexin accumulation during Magnaporthe oryzae infection (PubMed:27701783). Acts as negative regulator of salt tolerance (PubMed:25995326). During salt stress, activates the cation transporter HKT1, which mediates increased sodium uptake in roots, and contributes to sodium accumulation and salt toxicity (PubMed:25995326). Binds directly to the DNA sequence 5'-TGTTACAAATACC-3' in the promoter of the GA20OX2 gene to activate its expression at the transcriptional level during ethylene signaling (PubMed:30002253). Possesses transactivation activity in protoplasts (PubMed:25995326). {ECO:0000269|PubMed:16786297, ECO:0000269|PubMed:25995326, ECO:0000269|PubMed:27701783, ECO:0000269|PubMed:28829777, ECO:0000269|PubMed:30002253}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by infection with the fungal pathogen Magnaporthe oryzae. {ECO:0000269|PubMed:27701783}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009391636.1 | 0.0 | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Swissprot | Q10M41 | 1e-152 | EIL1A_ORYSJ; Protein ETHYLENE-INSENSITIVE 3-like 1a | ||||
TrEMBL | M0SD61 | 0.0 | M0SD61_MUSAM; Uncharacterized protein | ||||
STRING | GSMUA_Achr3P09440_001 | 0.0 | (Musa acuminata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP638 | 38 | 168 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20770.1 | 1e-137 | EIL family protein |
Publications ? help Back to Top | |||
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