 |
Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
GSMUA_Achr3P06620_001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 274aa MW: 30689.9 Da PI: 4.4775 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GSMUA_Achr3P06620_001 | genome | CIRAD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 58.4 | 1.2e-18 | 53 | 106 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++ eq+++Le+ Fe ++++ e++ +LA+ lgL+ rqV vWFqNrRa++k
GSMUA_Achr3P06620_001 53 KKRRLSVEQVRALERSFEVENKLEPERKLRLAQDLGLQPRQVAVWFQNRRARWK 106
456899***********************************************9 PP
|
| 2 | HD-ZIP_I/II | 130.9 | 4.9e-42 | 52 | 144 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88
ekkrrls eqv++LE+sFe e+kLeperK +la++LglqprqvavWFqnrRAR+ktkqlE+dy++Lk++y+al+ + ++L++++e+L
GSMUA_Achr3P06620_001 52 EKKRRLSVEQVRALERSFEVENKLEPERKLRLAQDLGLQPRQVAVWFQNRRARWKTKQLERDYTTLKASYEALRLDYDSLHRDKESLL 139
69************************************************************************************** PP
HD-ZIP_I/II 89 eelke 93
++++e
GSMUA_Achr3P06620_001 140 AQIEE 144
99986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 274 aa
Download sequence Send
to blast |
MKRPIADLDS LMPICPSAQE SGTYGGEFQP SMDGLEDEDD CGAAAAAAAP GEKKRRLSVE 60
QVRALERSFE VENKLEPERK LRLAQDLGLQ PRQVAVWFQN RRARWKTKQL ERDYTTLKAS 120
YEALRLDYDS LHRDKESLLA QIEELKAKLT GEESLSVSSV KEEPVVSEAG TKAAASEEEP 180
PALIYKDGSS DSDSSAVLND AVLKDYDSRR RGMSSSQDAA PPATAELGSS TSSHHHMLKM 240
EEEEEFLGRE EPFTSFFSDE QPPTLNWYYP DHWN
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 100 | 108 | RRARWKTKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Down-regulated in leaves by drought stress. {ECO:0000269|PubMed:17999151}. |
