PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr3P02820_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 401aa    MW: 45203.6 Da    PI: 8.3632
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr3P02820_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_122.91.9e-072763111752
                            HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                            ArrsR RK+++i+eLe+ v++L+a+ +    ele l
  GSMUA_Achr3P02820_001 276 ARRSRVRKLQYIAELERNVQALQAKGSGISAELEFL 311
                            9***********************998888888766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0064265324IPR004827Basic-leucine zipper domain
CDDcd147033.14E-15266315No hitNo description
Gene3DG3DSA:1.20.5.1707.4E-5276318No hitNo description
SuperFamilySSF579597.03E-5276318No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    Send to blast
MRVVVVLFCA LSGSVGRGFV SSFYFGFLPF FQLFIWGIRM GENEGFVPDQ RRMANTSFRS  60
LVPIGKQSFL PPKCPVPTLS PFYDDHGATG SRGIPNANHR RTSSESFLID EQPPWLDDLL  120
NEPESPVKRG SHRRSSSDSF AYLSGAKVSS GITNLALEGC GQSTVATLCP WGLNELDNQR  180
DINHYPYYVE NNSSGRPQHR ECESTTTMGS ITLGKNKIVH SRAYPVPRER NVVPSDSDEK  240
KDQQGSSNYP KCPSDKEDSF SKQYAADPRS AKQQFARRSR VRKLQYIAEL ERNVQALQAK  300
GSGISAELEF LDRQNLILNL ENKALKQRLD SLSQEQLFKR FQQEMLEQEV AHLRIFYQQH  360
QAAPLHGHRR STDLDSQFAN LSLKHNDTDA GPDPVTNPLH I
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1276282RRSRVRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009390775.20.0PREDICTED: uncharacterized protein At4g06598-like isoform X1
TrEMBLM0SBA00.0M0SBA0_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr3P02820_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33103666
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.26e-70bZIP family protein