PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr3P02490_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bHLH
Protein Properties Length: 422aa    MW: 45869.6 Da    PI: 7.7073
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr3P02490_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.89.1e-09244291455
                            HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            ah+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  GSMUA_Achr3P02490_001 244 AHSLAERVRREKISKRMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 291
                            8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.69E-10238295No hitNo description
SuperFamilySSF474597.85E-17238308IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.4E-18240315IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.205240290IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.4E-6244291IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.7E-9246296IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    Send to blast
MEKEGVWGLN WQSADALVPP ELNSGSSASG QLPQCLLDLK WTQPMTHEAD FQSALRSLVS  60
SPSSHPAELI GRLGVVCNSG EMSPSPRRRS TRLNSSPKLD LSVMDRSHQG RGGLPMPANP  120
LPGAHLFTSS ASRSGGRSSA GFPAQFGLPE TPGNLSRDSE LGNGQDESSV SDRVTAEASS  180
LRDVVDSNAR KRKAAAKGKG KLENSDAKRC KAAESNGKNS DAKPPEPLKD YIHVRARRGQ  240
ATDAHSLAER VRREKISKRM KFLQDLVPGC NKVTGKAVML DEIINYVQSL QRQVEFLSMK  300
LATMNPQLDN MELLIPKLMY QTHGTTTPQP LYPVETTSLS FSYAHRPQAA SGLEAQFSMD  360
ALESSLSQPQ NLQPAPLDVG DYWEDDLHSV AQLGLGQNQE AAISSQGFHS QIMHANHMKI  420
EL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009390808.10.0PREDICTED: transcription factor bHLH63-like
TrEMBLM0SB670.0M0SB67_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr3P02490_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP91938137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07340.12e-56bHLH family protein