PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr3P00380_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family G2-like
Protein Properties Length: 262aa    MW: 29062.4 Da    PI: 9.4729
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr3P00380_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.82.1e-32152205255
                G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                            pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  GSMUA_Achr3P00380_001 152 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 205
                            9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.606.3E-29149205IPR009057Homeodomain-like
SuperFamilySSF466898.78E-16149206IPR009057Homeodomain-like
TIGRFAMsTIGR015571.4E-23152205IPR006447Myb domain, plants
PfamPF002491.4E-7153204IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    Send to blast
MELFSAHLDL SLQISPPNTT PSGWRKPDEK MELGFWRRTL DSTTTTNNNV TASAASSAAA  60
FKLSSVNPGV TDSTTTSDDI LHHPQHRHHL PLLPEGYHQD HISLKPIRGI PIYQHPPSFP  120
LLSPHQLQPS QDLPRPRYLP TRFAARRTTR APRMRWTTTL HARFVHAVEL LGGHERATPK  180
SVLELMDVKD LTLAHVKSHL QMYRTVKNTD RPAASSDGFA NGSAEENSEE NLVGVHNHHG  240
SESSAAHHGA NHGALWSSNS SR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A6e-17153207458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B6e-17153207458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A6e-17153207357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B6e-17153207357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C6e-17153207357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D6e-17153207357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A6e-17153207458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C6e-17153207458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D6e-17153207458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F6e-17153207458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H6e-17153207458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J6e-17153207458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009391047.10.0PREDICTED: probable transcription factor KAN2 isoform X3
TrEMBLM0SAK60.0M0SAK6_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr3P00380_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP47213665
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16560.11e-31G2-like family protein