 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
GSMUA_Achr2P22010_001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
|
| Family |
MYB |
| Protein Properties |
Length: 253aa MW: 27716 Da PI: 7.34 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GSMUA_Achr2P22010_001 | genome | CIRAD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 56.6 | 6.1e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd lv +++q+G+g+W++I+ g++R+ k+c++rw +yl
GSMUA_Achr2P22010_001 14 KGPWTPEEDITLVSYIQQHGPGNWRAIPPNTGLRRCSKSCRLRWTNYL 61
79********************************************97 PP
|
| 2 | Myb_DNA-binding | 52.3 | 1.3e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg++T +E++l+v++ +lG++ W++Ia++++ Rt++++k++w++yl
GSMUA_Achr2P22010_001 67 RGNFTDQEEKLIVHLQSLLGNR-WAAIASYLP-ERTDNDIKNYWNTYL 112
89********************.*********.*************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 253 aa
Download sequence Send
to blast |
MGRPPCCDKD GVKKGPWTPE EDITLVSYIQ QHGPGNWRAI PPNTGLRRCS KSCRLRWTNY 60
LRPGIKRGNF TDQEEKLIVH LQSLLGNRWA AIASYLPERT DNDIKNYWNT YLKKKLRKLE 120
IGGTDSPIGS ESKASPFDRS LSSRPSSTYA SSTENISRLL AGWMSGTSSK PGVAQASSAS 180
VRADTASSQG SASASSSNCI MSPEPLESLL GLHDSTPEGS EAQAPLSLLE SWLLDEDAGQ 240
KQENFLDMAT DYM
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1gv2_A | 4e-27 | 14 | 116 | 4 | 105 | MYB PROTO-ONCOGENE PROTEIN |
| 1h8a_C | 6e-27 | 14 | 116 | 27 | 128 | MYB TRANSFORMING PROTEIN |
| 1mse_C | 4e-27 | 14 | 116 | 4 | 105 | C-Myb DNA-Binding Domain |
| 1msf_C | 4e-27 | 14 | 116 | 4 | 105 | C-Myb DNA-Binding Domain |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor involved in the regulation of gene (e.g. drought-regulated and flavonoid biosynthetic genes) expression and stomatal movements leading to negative regulation of responses to drought and responses to other physiological stimuli (e.g. light). {ECO:0000269|PubMed:22018045}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by abscisic acid (ABA) and osmotic stress (salt stress). {ECO:0000269|PubMed:22018045}. |
