 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
GSMUA_Achr2P14750_001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 286aa MW: 32310.2 Da PI: 4.3446 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GSMUA_Achr2P14750_001 | genome | CIRAD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 60 | 3.7e-19 | 81 | 134 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++ eq+++Le+ Fe +++++ e++ +LA+ lgL+ rqV vWFqNrRa++k
GSMUA_Achr2P14750_001 81 KKRRLSVEQVKALEKNFEVENKLDPERKLRLAQDLGLQPRQVAVWFQNRRARWK 134
456899***********************************************9 PP
|
| 2 | HD-ZIP_I/II | 128.6 | 2.6e-41 | 80 | 172 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88
ekkrrls eqvk+LE++Fe e+kL+perK +la++LglqprqvavWFqnrRAR+ktkqlE+dy aLk+++dalk + ++L++++e+L
GSMUA_Achr2P14750_001 80 EKKRRLSVEQVKALEKNFEVENKLDPERKLRLAQDLGLQPRQVAVWFQNRRARWKTKQLERDYGALKARHDALKLDCDALSRDNEALL 167
69*************************************************************************************9 PP
HD-ZIP_I/II 89 eelke 93
+e++e
GSMUA_Achr2P14750_001 168 AEIAE 172
99876 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009637 | Biological Process | response to blue light |
| GO:0030308 | Biological Process | negative regulation of cell growth |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0048510 | Biological Process | regulation of timing of transition from vegetative to reproductive phase |
| GO:0048573 | Biological Process | photoperiodism, flowering |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 286 aa
Download sequence Send
to blast |
MVYKENLALS PSPYQVTLSL SLSLSLVDYL VFSLLLQSDL FYLFSVEEKG KYEAVLDGTE 60
ELDGCEEEEP CGTGLSGLGE KKRRLSVEQV KALEKNFEVE NKLDPERKLR LAQDLGLQPR 120
QVAVWFQNRR ARWKTKQLER DYGALKARHD ALKLDCDALS RDNEALLAEI AELKAKLADS 180
GMDAMESETK AVEEERPPLI HKDGASDSDS SVVFNDETSP HAGTVLHQHF LMGFRSQCPF 240
LPFEDKAQAE KGYLDEELLA GEELCSSLFS EQQAPNFSWY CSDEWD
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 128 | 136 | RRARWKTKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that may function as a negative regulator of the flowering time response to photoperiod. May act to repress cell expansion during plant development. {ECO:0000269|PubMed:14623244}. |
