PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GSMUA_Achr2P06600_001

Organism

Musa acuminata

Taxonomic ID

4641

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa

Family

BES1

Protein Properties

Length: 268aa MW: 29058.8 Da PI: 9.7168

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GSMUA_Achr2P06600_001	genome	CIRAD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	184.7	3.9e-57	4	109	2	103
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl...eeaeaagssa 86 g+gr ptwkErEnnkrRERrRRaiaaki++GLRa Gnyklpk++DnneVlkALcreAGw+vedDGttyrkg+kp+ e +++g s+ GSMUA_Achr2P06600_001 4 GGGRLPTWKERENNKRRERRRRAIAAKIFSGLRALGNYKLPKHCDNNEVLKALCREAGWIVEDDGTTYRKGCKPPpppPEVATGGPST 91 89**********************************************************************98766777889999 PP DUF822 87 saspesslq.sslkssal 103 ++sp+ss++ +s+ ss+ GSMUA_Achr2P06600_001 92 NISPCSSSHlLSPLSSSR 109 9****99666555543 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.3E-53	4	108	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence Send to blast
MTSGGGRLPT WKERENNKRR ERRRRAIAAK IFSGLRALGN YKLPKHCDNN EVLKALCREA 60 GWIVEDDGTT YRKGCKPPPP PPEVATGGPS TNISPCSSSH LLSPLSSSRL DNSNNPSVNP 120 SCLLPFLRNL STLPPLRISN SAPVTPPLSS PTASRPPKIR KPDWDYSAFP QSLFAASAPA 180 SPTRGRYHGL PAAIPECDES DASTVGSGRW INFQMTAPAS PTYNLRGRGG MEFEFESGRV 240 KPWEGERIHD VAVDDLDLTL GVGSTASK

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	2e-25	7	79	372	444	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	2e-25	7	79	372	444	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	2e-25	7	79	372	444	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	2e-25	7	79	372	444	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Positive brassinosteroid-signaling protein. Mediates downstream brassinosteroid-regulated growth response and feedback inhibition of brassinosteroid biosynthetic genes. May act as transcriptional repressor by binding the brassinosteroid-response element (5'-CGTGCG-3') in the promoter of GRAS32 (AC Q9LWU9), another positive regulator of brassinosteroid signaling (By similarity). {ECO:0000250}.
UniProt	Positive brassinosteroid-signaling protein. Mediates downstream brassinosteroid-regulated growth response and feedback inhibition of brassinosteroid (BR) biosynthetic genes (PubMed:17699623, PubMed:19220793). May act as transcriptional repressor by binding the brassinosteroid-response element (BREE) (5'-CGTG(T/C)G-3') in the promoter of DLT (AC Q9LWU9), another positive regulator of BR signaling (PubMed:19220793). Acts as transcriptional repressor of LIC, a negative regulator of BR signaling, by binding to the BRRE element of its promoter. BZR1 and LIC play opposite roles in BR signaling and regulation of leaf bending (PubMed:22570626). {ECO:0000269\|PubMed:17699623, ECO:0000269\|PubMed:19220793, ECO:0000269\|PubMed:22570626}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Down-regulated by 24-epibrassinolide. {ECO:0000269\|PubMed:22570626}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	BT042378	1e-66	BT042378.1 Zea mays full-length cDNA clone ZM_BFb0212H20 mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009389663.1	1e-153	PREDICTED: protein BZR1 homolog 1-like
Swissprot	B8B7S5	1e-108	BZR1_ORYSI; Protein BZR1 homolog 1
Swissprot	Q7XI96	1e-108	BZR1_ORYSJ; Protein BZR1 homolog 1
TrEMBL	M0S5Q1	0.0	M0S5Q1_MUSAM; Uncharacterized protein
STRING	GSMUA_Achr2P06600_001	0.0	(Musa acuminata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP5474	34	53

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19350.3	2e-67	BES1 family protein

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Tong H, et al. DWARF AND LOW-TILLERING acts as a direct downstream target of a GSK3/SHAGGY-like kinase to mediate brassinosteroid responses in rice. Plant Cell, 2012. 24(6): p. 2562-77 [PMID:22685166]